Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_N16
         (934 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071295-1|AAL48917.1|  227|Drosophila melanogaster RE32624p pro...    30   5.2  
AE014134-2694|AAF53519.1|  227|Drosophila melanogaster CG5861-PA...    30   5.2  

>AY071295-1|AAL48917.1|  227|Drosophila melanogaster RE32624p
           protein.
          Length = 227

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -3

Query: 362 LKNYFSGFRCFR--GLQIFIKFVEAVYHRTKVFLNSLRGQGGFNFFPQFLNC 213
           L  Y + ++C +  G+ IF + V+ +   T  + ++    G FNFF + L C
Sbjct: 25  LSEYGAFWKCVQAGGIYIFTQLVKMLVLATFFYSDAPSSSGEFNFFAEILRC 76


>AE014134-2694|AAF53519.1|  227|Drosophila melanogaster CG5861-PA
           protein.
          Length = 227

 Score = 29.9 bits (64), Expect = 5.2
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = -3

Query: 362 LKNYFSGFRCFR--GLQIFIKFVEAVYHRTKVFLNSLRGQGGFNFFPQFLNC 213
           L  Y + ++C +  G+ IF + V+ +   T  + ++    G FNFF + L C
Sbjct: 25  LSEYGAFWKCVQAGGIYIFTQLVKMLVLATFFYSDAPSSSGEFNFFAEILRC 76


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,516,161
Number of Sequences: 53049
Number of extensions: 470748
Number of successful extensions: 1313
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1192
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1309
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4607820675
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)