Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N13
(956 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 36 0.008
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 36 0.008
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.026
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.034
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 32 0.10
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.18
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.3
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 22 7.9
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 26 9.0
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 34.3 bits (75), Expect(2) = 0.003
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAPXPXPP 424
PPPP P P PP P P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 33.9 bits (74), Expect = 0.034
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 362 PPPXPXPAXXPPPXAPXPXPPP 427
PPP P P PP P P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.18
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 362 PPPXPXPAXXPPPXAPXPXPPPXXPP 439
PP P P PP P PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 21.8 bits (44), Expect(2) = 0.003
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 245 PXPXPPXPPPP 277
P PP PPPP
Sbjct: 5 PPGNPPPPPPP 15
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 24/69 (34%), Positives = 24/69 (34%), Gaps = 4/69 (5%)
Frame = +2
Query: 245 PXPXPPX-PP--PPXXXPXXXXXXXXXXXAXXXXXXXXXXXPPPPXPXPAXXP-PPXAPX 412
P P PP PP PP P A PP P PA P PP AP
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPA 475
Query: 413 PXPPPXXPP 439
P P P P
Sbjct: 476 PPPAPAPAP 484
Score = 31.1 bits (67), Expect = 0.24
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAP---XPXPPPXXPPXXXXXGXXXGXPGLPP 487
PP P P+ PP P P PPP PP G P PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPP---SNGTVSSPPNSPP 272
Score = 29.1 bits (62), Expect = 0.97
Identities = 24/96 (25%), Positives = 26/96 (27%), Gaps = 4/96 (4%)
Frame = +2
Query: 257 PPXPPP--PXXXPXXXXXXXXXXXAXXXXXXXXXXXPP--PPXPXPAXXPPPXAPXPXPP 424
PP PPP P PP PP P+ P P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 425 PXXPPXXXXXGXXXGXPGLPPNRGIPXXLXRXPPXP 532
P P G P PP +P PP P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPP---LPPAAPAPPPAP 480
Score = 26.2 bits (55), Expect = 6.8
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = +2
Query: 362 PPPXPXPAXXPPPXAPXPXPPPXXPPXXXXXGXXXGXPGLPP 487
PPP P P+ P P P P P LPP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 25.8 bits (54), Expect = 9.0
Identities = 23/100 (23%), Positives = 25/100 (25%), Gaps = 9/100 (9%)
Frame = +2
Query: 260 PXPPPPXXXPXXXXXXXXXXXAXXXXXXXXXXXPPPPXPXPAXXP---------PPXAPX 412
P PPPP P + P PA P PP
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 413 PXPPPXXPPXXXXXGXXXGXPGLPPNRGIPXXLXRXPPXP 532
P PP PP G P +P PP P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 35.9 bits (79), Expect = 0.008
Identities = 17/42 (40%), Positives = 18/42 (42%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAPXPXPPPXXPPXXXXXGXXXGXPGLP 484
PPPP P PP AP PP PP G PG+P
Sbjct: 1884 PPPPMALPKAGPPSAAPTSALPPAGPPAGAT--AISGNPGMP 1923
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.9 bits (79), Expect = 0.008
Identities = 28/104 (26%), Positives = 31/104 (29%), Gaps = 8/104 (7%)
Frame = +2
Query: 245 PXPXPPXPPPPXXXPXXXXXXXXXXXAXXXXXXXXXXXPP--------PPXPXPAXXPPP 400
P P P PP P A PP PP P P+ PP
Sbjct: 1141 PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPV 1200
Query: 401 XAPXPXPPPXXPPXXXXXGXXXGXPGLPPNRGIPXXLXRXPPXP 532
P PP PP GLPP +P + PP P
Sbjct: 1201 PKPSVGVPPVPPPSTAPP-VPTPSAGLPP---VPVPTAKAPPVP 1240
Score = 31.1 bits (67), Expect = 0.24
Identities = 24/103 (23%), Positives = 27/103 (26%), Gaps = 7/103 (6%)
Frame = +2
Query: 245 PXPXPPXPPPPXXXPXXXXXXXXXXXAXXXXXXXXXXXPP-------PPXPXPAXXPPPX 403
P P P PP P PP PP P P+ PP
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 404 APXPXPPPXXPPXXXXXGXXXGXPGLPPNRGIPXXLXRXPPXP 532
PP P G+PP +P PP P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPP---VPKPAAGVPPVP 1192
Score = 29.1 bits (62), Expect = 0.97
Identities = 19/66 (28%), Positives = 22/66 (33%)
Frame = +2
Query: 365 PPXPXPAXXPPPXAPXPXPPPXXPPXXXXXGXXXGXPGLPPNRGIPXXLXRXPPXP*IXG 544
PP P P+ PP P PP P G PP +P PP P +
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVP-PVPAPSGAPP---VPKPSVAAPPVP-VPS 1137
Query: 545 GGKTXP 562
G P
Sbjct: 1138 GAPPVP 1143
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.026
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAPXPXPPP-----XXPPXXXXXGXXXGXPGLPP 487
PPPP P P AP P PPP PP G P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP 779
Score = 33.9 bits (74), Expect = 0.034
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +2
Query: 362 PPPXPXPAXXPPPXAPXPXPPPXXPPXXXXXGXXXGXPGLPP 487
P P P P PPP AP PP PP G P PP
Sbjct: 742 PTPAPAPIPVPPP-APIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.32
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 6/38 (15%)
Frame = +2
Query: 362 PPPXPXPAXXPPPXAPX------PXPPPXXPPXXXXXG 457
PPP P PPP P P PPP PP G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 30.3 bits (65), Expect = 0.42
Identities = 20/49 (40%), Positives = 20/49 (40%), Gaps = 7/49 (14%)
Frame = +2
Query: 359 PPP----PXPXPAXXP-PPXAPXPX--PPPXXPPXXXXXGXXXGXPGLP 484
PPP P P PA P PP AP PPP PP G P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.97
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +2
Query: 392 PPPXAPXPXPPPXXPPXXXXXGXXXGXPGLPPNRGIPXXLXRXPPXP 532
PPP P P P P G P PP G+ PP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.2
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = +3
Query: 423 PPXPPPXXXXXXRXXAXXXSPPTGESLXXXSXXPXTPKXWGGEKPPP 563
PP PPP A PP + P P G PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.034
Identities = 17/43 (39%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Frame = +2
Query: 362 PPPXPXPAXXPPPXAPXPXPPP-XXPPXXXXXGXXXGXPGLPP 487
PP P A P AP P PPP PP G P PP
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 32.7 bits (71), Expect = 0.079
Identities = 14/28 (50%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAPX-PXPPPXXPP 439
P PP P + PPP AP P PP PP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPP 1732
Score = 29.9 bits (64), Expect = 0.55
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAPXPXPPPXXPPXXXXXG 457
PPPP P PP AP P P P G
Sbjct: 1715 PPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 32.3 bits (70), Expect = 0.10
Identities = 20/62 (32%), Positives = 20/62 (32%), Gaps = 1/62 (1%)
Frame = +2
Query: 257 PPXPPPPXXXPXXXXXXXXXXXAXXXXXXXXXXXPP-PPXPXPAXXPPPXAPXPXPPPXX 433
PP PPPP P P PP P P AP P PPP
Sbjct: 189 PPPPPPPP--PAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTL 246
Query: 434 PP 439
PP
Sbjct: 247 PP 248
Score = 31.9 bits (69), Expect = 0.14
Identities = 15/52 (28%), Positives = 17/52 (32%)
Frame = +2
Query: 245 PXPXPPXPPPPXXXPXXXXXXXXXXXAXXXXXXXXXXXPPPPXPXPAXXPPP 400
P P PP PPPP P + PPP P+ P P
Sbjct: 234 PLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRP 285
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.18
Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 1/59 (1%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAPXPXPPPXXPPXXXXXGXXXGXPGLPP-NRGIPXXLXRXPPXP 532
P P P PA PP + P P PP P P +P + PP P
Sbjct: 147 PSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.1 bits (57), Expect = 3.9
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAPXPXPP 424
P PP P PA P P A P PP
Sbjct: 3 PAPPPPPPA--PAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 9.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 380 PAXXPPPXAPXPXPPPXXPP 439
PA PPP AP P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 1/27 (3%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXA-PXPXPPPXXP 436
P PP P PP A P P PP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSP 154
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Frame = +2
Query: 365 PPXPXPAXXPPPXAPXPXPP-PXXPPXXXXXGXXXGXPGLP--PNRGIP 502
P P P P P P P P P PP PG P PN +P
Sbjct: 99 PEEPLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
Score = 26.6 bits (56), Expect = 5.2
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Frame = +2
Query: 359 PPPPXPXPAXXPPPXAPXPXPP-PXXPP 439
P P P P P P P P P P PP
Sbjct: 113 PVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 22.2 bits (45), Expect(2) = 7.9
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 245 PXPXPPXPPPP 277
P PP PPPP
Sbjct: 1091 PSAVPPPPPPP 1101
Score = 21.8 bits (44), Expect(2) = 7.9
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 359 PPPPXPXPA 385
PPPP P PA
Sbjct: 1095 PPPPPPPPA 1103
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Frame = +2
Query: 359 PPPPXPXPAXXPP--PXAPXPXPPPXXPP 439
PPPP P P P P P P P P
Sbjct: 358 PPPPMPAPIYNVPNVPTVPTVSPNPFLQP 386
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.317 0.159 0.615
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,445,864
Number of Sequences: 5004
Number of extensions: 21163
Number of successful extensions: 255
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 127
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 489310570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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