BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= MFBP03_F_N12 (908 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 32 0.028 AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 28 0.34 >AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein protein. Length = 596 Score = 31.9 bits (69), Expect = 0.028 Identities = 15/34 (44%), Positives = 17/34 (50%) Frame = -2 Query: 886 GXGXGVQXXXGNPXGXVGQGRDHGXRDNQGGFQG 785 G G G + G G G+GR G RD GGF G Sbjct: 63 GYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGG 96 >AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative differentiation regulator protein. Length = 1283 Score = 28.3 bits (60), Expect = 0.34 Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%) Frame = -2 Query: 904 GDPPGXGXGXGVQXXXGNPXGXVGQGRDHGXRD--NQGGFQG 785 G PG G G G G G+ RDH RD +GG G Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNG 250 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 412,247 Number of Sequences: 2352 Number of extensions: 3994 Number of successful extensions: 5 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 4 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5 length of database: 563,979 effective HSP length: 64 effective length of database: 413,451 effective search space used: 98401338 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -