BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N12
(908 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 32 0.028
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 28 0.34
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 31.9 bits (69), Expect = 0.028
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = -2
Query: 886 GXGXGVQXXXGNPXGXVGQGRDHGXRDNQGGFQG 785
G G G + G G G+GR G RD GGF G
Sbjct: 63 GYGGGGRGGRGGRGGGRGRGRGRGGRDGGGGFGG 96
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 28.3 bits (60), Expect = 0.34
Identities = 16/42 (38%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Frame = -2
Query: 904 GDPPGXGXGXGVQXXXGNPXGXVGQGRDHGXRD--NQGGFQG 785
G PG G G G G G+ RDH RD +GG G
Sbjct: 209 GGAPGGGGGSSGGPGPGGGGGGGGRDRDHRDRDREREGGGNG 250
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 412,247
Number of Sequences: 2352
Number of extensions: 3994
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 98401338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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