Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N11
(820 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 348 2e-95
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 348 2e-95
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 348 2e-95
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 347 4e-95
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 345 2e-94
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 343 5e-94
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 266 7e-71
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 258 2e-68
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 80 1e-14
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 36 0.13
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 34 0.71
AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1 s... 33 0.94
AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1 p... 33 0.94
AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein. 33 0.94
BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring comp... 32 2.2
BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring comp... 32 2.2
AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens ... 32 2.2
BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.9
BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.9
BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein. 32 2.9
AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens ... 32 2.9
AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.9
AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9 s... 32 2.9
AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5 s... 32 2.9
AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9 p... 32 2.9
AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5 p... 32 2.9
AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein. 32 2.9
AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein. 32 2.9
AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein. 32 2.9
AK125914-1|BAC86343.1| 167|Homo sapiens protein ( Homo sapiens ... 31 3.8
BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3 p... 31 5.0
BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein. 31 5.0
BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein. 31 5.0
AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7 s... 31 5.0
AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6 s... 31 5.0
AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3 s... 31 5.0
AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7 p... 31 5.0
AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6 p... 31 5.0
AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3 p... 31 5.0
AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein. 31 5.0
AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein. 31 5.0
AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein. 31 5.0
AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6 i... 31 5.0
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 6.6
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 6.6
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 6.6
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 6.6
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 6.6
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 6.6
AK128029-1|BAC87236.1| 167|Homo sapiens protein ( Homo sapiens ... 30 8.8
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 348 bits (855), Expect = 2e-95
Identities = 161/206 (78%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 347 bits (852), Expect = 4e-95
Identities = 160/206 (77%), Positives = 187/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG+NTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 345 bits (847), Expect = 2e-94
Identities = 160/206 (77%), Positives = 186/206 (90%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSF QAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFSQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILDI 720
SPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLDI 206
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQIGYPTVASVP 238
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 343 bits (843), Expect = 5e-94
Identities = 160/205 (78%), Positives = 184/205 (89%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNI 642
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNMLNI
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNI 180
Query: 643 SPFSYGLVVKQVYDSGTIFAPEILD 717
SPFS+GLV++QV+D+G+I+ PE+LD
Sbjct: 181 SPFSFGLVIQQVFDNGSIYNPEVLD 205
Score = 34.3 bits (75), Expect = 0.54
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L GYPT+AS P
Sbjct: 213 SRFLEGVRNVASVCLQTGYPTVASVP 238
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 266 bits (652), Expect = 7e-71
Identities = 124/155 (80%), Positives = 139/155 (89%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLPHI+GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 120
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 567
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 121 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 155
Score = 33.9 bits (74), Expect = 0.71
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 756 GVANVAALSLAIGYPTIASAP 818
GV NVA++ L IGYPT+AS P
Sbjct: 156 GVRNVASVCLQIGYPTVASVP 176
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 258 bits (631), Expect = 2e-68
Identities = 122/155 (78%), Positives = 138/155 (89%)
Frame = +1
Query: 103 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 282
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 283 MRKAIKDHLDNNPALEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLS 462
MRKAI+ HL+NNPALEKLLP ++GNVGFVFT+ DL E+RD LL NKV A AR GAIAP
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCE 119
Query: 463 VVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEII 567
V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI+
Sbjct: 120 VTVPAQNTGLGPEKTSFFQALGITTKISRGTIEIL 154
Score = 33.9 bits (74), Expect = 0.71
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 756 GVANVAALSLAIGYPTIASAP 818
GV NVA++ L IGYPT+AS P
Sbjct: 155 GVRNVASVCLQIGYPTVASVP 175
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 79.8 bits (188), Expect = 1e-14
Identities = 35/45 (77%), Positives = 43/45 (95%)
Frame = +1
Query: 586 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDI 720
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDI 46
Score = 36.3 bits (80), Expect = 0.13
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = +3
Query: 741 AKFQAGVANVAALSLAIGYPTIASAP 818
++F GV NVA++ L IGYPT+AS P
Sbjct: 53 SRFLEGVRNVASVCLQIGYPTVASVP 78
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 36.3 bits (80), Expect = 0.13
Identities = 40/144 (27%), Positives = 58/144 (40%), Gaps = 1/144 (0%)
Frame = +2
Query: 236 SRYVAPVSCSWEKTL*CAKPSKTTWTTIQPSRNCCHTSRATLASCSPAETSLRSVTNCWR 415
S Y AP+ + + A S +T T + H S +P TS +VT +
Sbjct: 214 STYTAPLMTATTSRISQAHSSISTAKTSTSLHS--HASSTHHPEVTP--TSTTNVTP--K 267
Query: 416 TKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-P 592
+ SR PV +S P TP + P S S +K++T Y + S P
Sbjct: 268 STSRDTSTPVTHTTSATSSRPPTPITTHSSPTRSSPLSSTGPMTATSIKTTTTYPTPSHP 327
Query: 593 VTRLELLKPPFSTC*TSLHSHMVL 664
T L PPFST + +H V+
Sbjct: 328 QTTLTTHVPPFSTSSVTPSTHTVI 351
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 33.9 bits (74), Expect = 0.71
Identities = 14/21 (66%), Positives = 17/21 (80%)
Frame = +3
Query: 756 GVANVAALSLAIGYPTIASAP 818
GV NVA++ L IGYPT+AS P
Sbjct: 1 GVRNVASVCLQIGYPTVASVP 21
>AF152479-1|AAD43740.1| 807|Homo sapiens protocadherin alpha 1
short form protein protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.94
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AF152305-1|AAD43699.1| 950|Homo sapiens protocadherin alpha 1
protein.
Length = 950
Score = 33.5 bits (73), Expect = 0.94
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>AC005609-13|AAC34325.1| 807|Homo sapiens KIAA0345-like 13 protein.
Length = 807
Score = 33.5 bits (73), Expect = 0.94
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G +G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTIGAV 577
>BC012801-1|AAH12801.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 231 PYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRETVAT 344
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>BC009870-1|AAH09870.1| 666|Homo sapiens gamma tubulin ring complex
protein (76p gene) protein.
Length = 666
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 231 PYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRETVAT 344
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 412 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 447
>AK127306-1|BAC86926.1| 254|Homo sapiens protein ( Homo sapiens
cDNA FLJ45374 fis, clone BRHIP3019643, highly similar
to Homo sapiens gamma tubulin ring complex protein (76p
gene) (76P). ).
Length = 254
Score = 32.3 bits (70), Expect = 2.2
Identities = 15/38 (39%), Positives = 23/38 (60%)
Frame = +3
Query: 231 PYLATWLQYRAHGKKHYDAQSHQRPPGQQSSPRETVAT 344
P L ++Y HGK+H DA + P +++SPRE A+
Sbjct: 34 PLLHLTIEY--HGKEHKDATQAREGPSRETSPREAPAS 69
>BC104804-1|AAI04805.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC104802-1|AAI04803.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>BC033735-1|AAH33735.1| 890|Homo sapiens PCDHA5 protein protein.
Length = 890
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ39453 fis, clone PROST2010046, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 577
Score = 31.9 bits (69), Expect = 2.9
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 2/126 (1%)
Frame = +2
Query: 296 SKTTWTTIQPSRNC-CHTSRATLASCSPAETSLRSVTNCWRTKSRLQLVPVPLPHCQSSF 472
S ++++T + S + HTS +P TS ++T ++ S PV SS
Sbjct: 43 SPSSFSTAKTSTSLPYHTSSTHHPEVTP--TSTTNIT--FKHTSTGTRTPVAHTTSASSS 98
Query: 473 PPTTPASVQRKPLSSKLFPSLPKFQRVLLKSSTMYTS*S-PVTRLELLKPPFSTC*TSLH 649
TP + P S F S +++T Y + S P T L PPFST +
Sbjct: 99 RLPTPFTTHSPPTGSSPFSSTGPMTATSFQTTTTYPTPSHPQTTLPTHVPPFSTSLVTPS 158
Query: 650 SHMVLL 667
+H V++
Sbjct: 159 THTVII 164
>AJ007610-1|CAC22257.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152487-1|AAD43748.1| 842|Homo sapiens protocadherin alpha 9
short form protein protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152483-1|AAD43744.1| 816|Homo sapiens protocadherin alpha 5
short form protein protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AF152317-1|AAD43711.1| 950|Homo sapiens protocadherin alpha 9
protein.
Length = 950
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AF152313-1|AAD43707.1| 936|Homo sapiens protocadherin alpha 5
protein.
Length = 936
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-9|AAC34321.1| 816|Homo sapiens KIAA0345-like 9 protein.
Length = 816
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 528 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LVPRVGGTGGAV 576
>AC005609-5|AAC34313.1| 842|Homo sapiens KIAA0345-like 5 protein.
Length = 842
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 577
>AB002343-1|BAA20803.2| 845|Homo sapiens KIAA0345 protein.
Length = 845
Score = 31.9 bits (69), Expect = 2.9
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P ++G G V
Sbjct: 532 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LTPRMRGTDGAV 580
>AK125914-1|BAC86343.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ43926 fis, clone TESTI4012556. ).
Length = 167
Score = 31.5 bits (68), Expect = 3.8
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Frame = +2
Query: 290 KPSKTTWTTIQPSRNCCHTSRATLA-SCSPAETSLRSVTNCWRTKSRLQLVPVPL--PHC 460
KP + T T SR+ C SR TL + SP TS R +T S+L++ P P C
Sbjct: 4 KPPRCTRT----SRSSC--SRTTLRPAASPNTTSSRGLTVHPPCSSKLRMDPTPAWPASC 57
Query: 461 QSSFPPTTPASVQRKPLSSKLFPSLP 538
++ P++ A R L + SLP
Sbjct: 58 EALMGPSSSAGPARLRLPPRRHSSLP 83
>BC129807-1|AAI29808.1| 824|Homo sapiens protocadherin alpha 3
protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC069064-1|AAH69064.1| 824|Homo sapiens PCDHA3 protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>BC036674-1|AAH36674.1| 950|Homo sapiens PCDHA6 protein protein.
Length = 950
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152485-1|AAD43746.1| 789|Homo sapiens protocadherin alpha 7
short form protein protein.
Length = 789
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152484-1|AAD43745.1| 803|Homo sapiens protocadherin alpha 6
short form protein protein.
Length = 803
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152481-1|AAD43742.1| 824|Homo sapiens protocadherin alpha 3
short form protein protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AF152315-1|AAD43709.1| 937|Homo sapiens protocadherin alpha 7
protein.
Length = 937
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152314-1|AAD43708.1| 950|Homo sapiens protocadherin alpha 6
protein.
Length = 950
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AF152311-1|AAD43705.1| 950|Homo sapiens protocadherin alpha 3
protein.
Length = 950
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-11|AAC34323.1| 824|Homo sapiens KIAA0345-like 11 protein.
Length = 824
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L+P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LMPRVGGIGGAV 577
>AC005609-8|AAC34320.1| 803|Homo sapiens KIAA0345-like 8 protein.
Length = 803
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AC005609-7|AAC34319.1| 789|Homo sapiens KIAA0345-like 7 protein.
Length = 789
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 529 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 577
>AB209205-1|BAD92442.1| 430|Homo sapiens protocadherin alpha 6
isoform 2 precursor variant protein.
Length = 430
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 217 QMQQIRISLRGSSIVLMGKNTMMRKAIKDHLDNNPALEKLLPHIKGNVGFV 369
++ Q ++S R + + +G N ++ + D DN PAL L P + G G V
Sbjct: 178 ELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPAL--LAPRVGGTGGAV 226
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 686 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 567
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 686 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 567
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 276 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 686 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 567
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 686 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 567
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 686 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 567
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 30.7 bits (66), Expect = 6.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 686 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 567
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
>AK128029-1|BAC87236.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ46148 fis, clone TESTI4000600. ).
Length = 167
Score = 30.3 bits (65), Expect = 8.8
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 290 KPSKTTWTTIQPSRNCCHTSRATLA-SCSPAETSLRSVTNCWRTKSRLQLVPVPL--PHC 460
KP + T T SR+ C SR TL + SP TS R T S+L++ P P C
Sbjct: 4 KPPRCTRT----SRSSC--SRTTLRPAASPNTTSSRGQTVHPPCSSKLRMDPTPAWPASC 57
Query: 461 QSSFPPTTPASVQRKPLSSKLFPSLP 538
++ P++ A R L + SLP
Sbjct: 58 EALMGPSSSAGPARLRLPPRRHSSLP 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,751,111
Number of Sequences: 237096
Number of extensions: 3295008
Number of successful extensions: 12546
Number of sequences better than 10.0: 61
Number of HSP's better than 10.0 without gapping: 11888
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12529
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10203625794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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