Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N09
(875 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X iso... 142 1e-33
CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein. 142 1e-33
BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein. 142 1e-33
BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein. 142 1e-33
BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4, X... 142 1e-33
BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4, X... 142 1e-33
AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X ... 142 1e-33
M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y iso... 142 1e-33
BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4, Y... 142 1e-33
BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4, Y... 142 1e-33
AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4, Y... 142 1e-33
AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y ... 142 1e-33
AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4, X... 140 5e-33
BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein. 140 6e-33
AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4 pr... 139 1e-32
Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4 prot... 113 1e-24
BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein. 105 2e-22
M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar prot... 104 5e-22
AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein. 33 1.8
AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta ch... 32 2.4
AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens ... 31 4.1
AB067470-1|BAB67776.1| 1480|Homo sapiens KIAA1883 protein protein. 30 9.6
>M58458-1|AAA63255.1| 263|Homo sapiens ribosomal protein S4X
isoform protein.
Length = 263
Score = 142 bits (345), Expect = 1e-33
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>CR456735-1|CAG33016.1| 263|Homo sapiens RPS4X protein.
Length = 263
Score = 142 bits (345), Expect = 1e-33
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>BC100904-1|AAI00905.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 142 bits (345), Expect = 1e-33
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>BC100903-1|AAI00904.1| 263|Homo sapiens RPS4X protein protein.
Length = 263
Score = 142 bits (345), Expect = 1e-33
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>BC071662-1|AAH71662.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 142 bits (345), Expect = 1e-33
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>BC000472-1|AAH00472.1| 263|Homo sapiens ribosomal protein S4,
X-linked protein.
Length = 263
Score = 142 bits (345), Expect = 1e-33
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>AF041428-1|AAB96968.1| 263|Homo sapiens ribosomal protein s4 X
isoform protein.
Length = 263
Score = 142 bits (345), Expect = 1e-33
Identities = 65/77 (84%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>M58459-1|AAA63256.1| 263|Homo sapiens ribosomal protein S4Y
isoform protein.
Length = 263
Score = 142 bits (344), Expect = 1e-33
Identities = 64/77 (83%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 98.7 bits (235), Expect = 2e-20
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++
Sbjct: 71 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKIT 130
Query: 463 TG 468
G
Sbjct: 131 VG 132
Score = 58.0 bits (134), Expect = 4e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDP+IKV ++Q+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPVIKVNDTVQIDLGT-GKIINFIKFDTGNLCMVIGGANLGR--V 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>BC100905-1|AAI00906.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 142 bits (344), Expect = 1e-33
Identities = 64/77 (83%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 98.7 bits (235), Expect = 2e-20
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++
Sbjct: 71 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKIT 130
Query: 463 TG 468
G
Sbjct: 131 VG 132
Score = 58.0 bits (134), Expect = 4e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDP+IKV ++Q+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPVIKVNDTVQIDLGT-GKIINFIKFDTGNLCMVIGGANLGR--V 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>BC010286-1|AAH10286.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 protein.
Length = 263
Score = 142 bits (344), Expect = 1e-33
Identities = 64/77 (83%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 98.7 bits (235), Expect = 2e-20
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++
Sbjct: 71 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKIT 130
Query: 463 TG 468
G
Sbjct: 131 VG 132
Score = 58.0 bits (134), Expect = 4e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDP+IKV ++Q+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPVIKVNDTVQIDLGT-GKIINFIKFDTGNLCMVIGGANLGR--V 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>AK222594-1|BAD96314.1| 263|Homo sapiens ribosomal protein S4,
Y-linked 1 Y isoform variant protein.
Length = 263
Score = 142 bits (344), Expect = 1e-33
Identities = 64/77 (83%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 98.7 bits (235), Expect = 2e-20
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++
Sbjct: 71 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKIT 130
Query: 463 TG 468
G
Sbjct: 131 VG 132
Score = 58.0 bits (134), Expect = 4e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDP+IKV ++Q+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPVIKVNDTVQIDLGT-GKIINFIKFDTGNLCMVIGGANLGR--V 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>AF041427-1|AAB96967.1| 263|Homo sapiens ribosomal protein s4 Y
isoform protein.
Length = 263
Score = 142 bits (344), Expect = 1e-33
Identities = 64/77 (83%), Positives = 70/77 (90%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 98.7 bits (235), Expect = 2e-20
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++
Sbjct: 71 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKIT 130
Query: 463 TG 468
G
Sbjct: 131 VG 132
Score = 58.0 bits (134), Expect = 4e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDP+IKV ++Q+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPVIKVNDTVQIDLGT-GKIINFIKFDTGNLCMVIGGANLGR--V 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>AK222479-1|BAD96199.1| 263|Homo sapiens ribosomal protein S4,
X-linked X isoform variant protein.
Length = 263
Score = 140 bits (340), Expect = 5e-33
Identities = 64/77 (83%), Positives = 69/77 (89%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+AP PSTGPHKLRECLPL+IFLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPHPSTGPHKLRECLPLIIFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI QR IK+DGKVR
Sbjct: 61 VKKICMQRFIKIDGKVR 77
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 71 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>BC100906-1|AAI00907.1| 262|Homo sapiens RPS4Y1 protein protein.
Length = 262
Score = 140 bits (339), Expect = 6e-33
Identities = 63/76 (82%), Positives = 69/76 (90%)
Frame = +3
Query: 75 ARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEV 254
ARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+EV
Sbjct: 1 ARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDEV 60
Query: 255 LKIVKQRLIKVDGKVR 302
KI QR IK+DGKVR
Sbjct: 61 KKICMQRFIKIDGKVR 76
Score = 98.7 bits (235), Expect = 2e-20
Identities = 42/62 (67%), Positives = 51/62 (82%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ D TYPAGFMDV+SIEKT E FRL+YD KGRF +HRIT EEAKYKLCKV+++
Sbjct: 70 KIDGKVRVDVTYPAGFMDVISIEKTGEHFRLVYDTKGRFAVHRITVEEAKYKLCKVRKIT 129
Query: 463 TG 468
G
Sbjct: 130 VG 131
Score = 58.0 bits (134), Expect = 4e-08
Identities = 29/72 (40%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDP+IKV ++Q+++ K+ GNLC + G LG
Sbjct: 135 IPHLVTHDARTIRYPDPVIKVNDTVQIDLGT-GKIINFIKFDTGNLCMVIGGANLGR--V 191
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 192 GVITNRERHPGS 203
>AF497481-1|AAM18074.1| 263|Homo sapiens ribosomal protein S4
protein.
Length = 263
Score = 139 bits (337), Expect = 1e-32
Identities = 62/77 (80%), Positives = 69/77 (89%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNE 251
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL++FLRNRLKYALTG+E
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIVFLRNRLKYALTGDE 60
Query: 252 VLKIVKQRLIKVDGKVR 302
V KI Q +K+DGKVR
Sbjct: 61 VKKICMQHFLKIDGKVR 77
Score = 93.5 bits (222), Expect = 9e-19
Identities = 40/63 (63%), Positives = 51/63 (80%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ D TYPAGF+DV+SIEKT E FRL+Y+ KG F +HRIT EEAKYKLCKV+++
Sbjct: 71 KIDGKVRVDITYPAGFIDVISIEKTGEHFRLVYNTKGCFAVHRITVEEAKYKLCKVRKIT 130
Query: 463 TGT 471
GT
Sbjct: 131 VGT 133
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/72 (38%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV ++Q+++ K+ + GN+C + LG
Sbjct: 136 IPHLVTHDARTIRYPDPLIKVNDTVQIDLGT-GKITSFIKFDTGNVCMVIAGANLGR--V 192
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 193 GVITNRERHPGS 204
>Z70767-1|CAA94808.1| 59|Homo sapiens ribosomal protein S4
protein.
Length = 59
Score = 113 bits (271), Expect = 1e-24
Identities = 50/56 (89%), Positives = 53/56 (94%)
Frame = +3
Query: 72 MARGPKKHLKRLNAPKAWMLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYAL 239
MARGPKKHLKR+ APK WMLDKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYAL
Sbjct: 1 MARGPKKHLKRVAAPKHWMLDKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYAL 56
>BC007308-1|AAH07308.2| 243|Homo sapiens RPS4X protein protein.
Length = 243
Score = 105 bits (253), Expect = 2e-22
Identities = 48/57 (84%), Positives = 52/57 (91%)
Frame = +3
Query: 132 DKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 302
DKL GV+APRPSTGPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVR
Sbjct: 1 DKLTGVFAPRPSTGPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVR 57
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 51 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 110
Query: 463 TGT 471
GT
Sbjct: 111 VGT 113
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 116 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 172
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 173 GVITNRERHPGS 184
>M22146-1|AAA36597.1| 244|Homo sapiens protein ( Human scar protein
mRNA, complete cds. ).
Length = 244
Score = 104 bits (249), Expect = 5e-22
Identities = 45/63 (71%), Positives = 54/63 (85%)
Frame = +1
Query: 283 RLMGKLGTDPTYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVA 462
++ GK+ TD TYPAGFMDV+SI+KT E FRLIYD KGRF +HRITPEEAKYKLCKV+++
Sbjct: 52 KIDGKVRTDITYPAGFMDVISIDKTGENFRLIYDTKGRFAVHRITPEEAKYKLCKVRKIF 111
Query: 463 TGT 471
GT
Sbjct: 112 VGT 114
Score = 103 bits (246), Expect = 1e-21
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +3
Query: 126 MLDKLGGVYAPRPSTGPHKLRECLPLVIFLRNRLKYALTGNEVLKIVKQRLIKVDGKVR 302
MLDKL GV+APRPS GPHKLRECLPL+IFLRNRLKYALTG+EV KI QR IK+DGKVR
Sbjct: 1 MLDKLTGVFAPRPS-GPHKLRECLPLIIFLRNRLKYALTGDEVKKICMQRFIKIDGKVR 58
Score = 59.7 bits (138), Expect = 1e-08
Identities = 31/72 (43%), Positives = 42/72 (58%)
Frame = +2
Query: 479 VPYLVTHDGRTIRXPDPLIKVXXSIQLNIANYXKLWTXSSLSLGNLCXIPGSX*LGAXWA 658
+P+LVTHD RTIR PDPLIKV +IQ+++ K+ GNLC + G LG
Sbjct: 117 IPHLVTHDARTIRYPDPLIKVNDTIQIDLET-GKITDFIKFDTGNLCMVTGGANLGR--I 173
Query: 659 PIXVPRKKXPGS 694
+ R++ PGS
Sbjct: 174 GVITNRERHPGS 185
>AY358764-1|AAQ89124.1| 182|Homo sapiens EPQL1862 protein.
Length = 182
Score = 32.7 bits (71), Expect = 1.8
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = +1
Query: 313 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGT 471
+YPA + D I + E+FRL+ + + RI + K C ++RV T
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRRICASASAPKTCSIERVLRKT 148
>AJ301497-1|CAC34202.1| 76|Homo sapiens T-cell receptor beta chain
VJ region protein.
Length = 76
Score = 32.3 bits (70), Expect = 2.4
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Frame = +1
Query: 301 GTDPTYPAGFM-DVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATG 468
G++ TY +GF+ D I + N F + T+ ++PE++ LC V RV TG
Sbjct: 9 GSEATYESGFVIDKFPISRPNLTFSTL-------TVSNMSPEDSSIYLCSVLRVVTG 58
>AK024165-1|BAB14843.1| 182|Homo sapiens protein ( Homo sapiens
cDNA FLJ14103 fis, clone MAMMA1001073. ).
Length = 182
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 313 TYPAGFMDVVSIEKTNELFRLIYDVKGRFTIHRITPEEAKYKLCKVKRVATGT 471
+YPA + D I + E+FRL+ + + +I + K C ++RV T
Sbjct: 96 SYPANYSDDSKIWRPVEIFRLVSKYQNEISDRKICASASAPKTCSIERVLRKT 148
>AB067470-1|BAB67776.1| 1480|Homo sapiens KIAA1883 protein protein.
Length = 1480
Score = 30.3 bits (65), Expect = 9.6
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 723 PPRGXPPXPPXRVXTXXXSKXPXXGAPKKGVXFFPXP 833
PPR PP PP R P AP+ G P P
Sbjct: 436 PPRPPPPPPPPRDGPFPWPWPPAHSAPRPGTLSSPFP 472
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,799,518
Number of Sequences: 237096
Number of extensions: 3016577
Number of successful extensions: 16125
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 14903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15999
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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