Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N08
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.60
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.1
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.1
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.2
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.2
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.2
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 7.4
U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical pr... 28 9.8
U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical pr... 28 9.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 28 9.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 28 9.8
AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine re... 28 9.8
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.60
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 170 PKEDNSINTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 337
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
P PPPGG GG F PPP P
Sbjct: 662 PVPPPGGLGG--FMPPPPPP 679
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.1
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
P PPPGG GG F PPP P
Sbjct: 662 PVPPPGGLGG--FMPPPPPP 679
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 780 LSPL*XXPPPPPGGXGGXXFFRPPPXP 860
L P+ PPPPP GG PPP P
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 744 PGLXGGXXGXXFLSPL*XX--PPPPPGGXGGXXFFRPPPXP 860
P + GG L P+ PPPPPGG PPP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPPPGG G PPP P
Sbjct: 773 PPPPPGGFKGGP---PPPPP 789
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPPPGG PPP P
Sbjct: 744 PPPPPGGLPPISGGPPPPPP 763
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 780 LSPL*XXPPPPPGGXGGXXFFRPPPXP 860
L P+ PPPPP GG PPP P
Sbjct: 751 LPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 744 PGLXGGXXGXXFLSPL*XX--PPPPPGGXGGXXFFRPPPXP 860
P + GG L P+ PPPPPGG PPP P
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 747
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPPPGG G PPP P
Sbjct: 773 PPPPPGGFKGGP---PPPPP 789
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPPPGG PPP P
Sbjct: 744 PPPPPGGLPPISGGPPPPPP 763
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 780 LSPL*XXPPPPPGGXGGXXFFRPPPXP 860
L P+ PPPPP GG PPP P
Sbjct: 334 LPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +3
Query: 744 PGLXGGXXGXXFLSPL*XX--PPPPPGGXGGXXFFRPPPXP 860
P + GG L P+ PPPPPGG PPP P
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPP 330
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPPPGG G PPP P
Sbjct: 356 PPPPPGGFKGGP---PPPPP 372
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPPPGG PPP P
Sbjct: 327 PPPPPGGLPPISGGPPPPPP 346
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.3
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -2
Query: 603 GGVPXPPXFWFKXGRXIXPPXXGXXPPP 520
GG+P PP F G PP G PPP
Sbjct: 81 GGIPPPPPM-FAGGIPPPPPMMGGIPPP 107
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPPP GG PPP P
Sbjct: 40 PPPPPPPCGGGYEAPPPPPP 59
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 176 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 346
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 176 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 346
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>U00063-8|AAM48535.1| 1031|Caenorhabditis elegans Hypothetical
protein F56C9.10b protein.
Length = 1031
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 173 KEDNSINTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 298
K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 45 KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>U00063-7|AAK18965.1| 1028|Caenorhabditis elegans Hypothetical
protein F56C9.10a protein.
Length = 1028
Score = 27.9 bits (59), Expect = 9.8
Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 173 KEDNSINTLAESAKKTIEELREKVESALAPETVK-KNF-GTMVD 298
K+D L E +K EE +EKVE +AP K KN G ++D
Sbjct: 45 KKDPKPEVLEEVVEKNREEDKEKVEETVAPTIEKEKNISGDLLD 88
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPP G G F PPP P
Sbjct: 322 PPPPHFGMGPPRGFMPPPHP 341
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 27.9 bits (59), Expect = 9.8
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +3
Query: 801 PPPPPGGXGGXXFFRPPPXP 860
PPPP G G F PPP P
Sbjct: 322 PPPPHFGMGPPRGFMPPPHP 341
>AF024503-9|AAG24084.1| 327|Caenorhabditis elegans Serpentine
receptor, class h protein266 protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = -1
Query: 313 KFVEAVYHRAKVFLNSLRGQGGFNFFPQFLNCFLRTLSQRIYAIVFFRSI 164
KF++A+Y +A VF +L+ + QF + + +T + ++ IV I
Sbjct: 228 KFIQAMYIQAAVFFLNLQLPILYTVLSQFTDFYSQTANNLVFIIVSLHGI 277
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,250,633
Number of Sequences: 27780
Number of extensions: 264593
Number of successful extensions: 1129
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 837
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1089
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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