Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N06
(876 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC550.06c |hsp10||mitochondrial heat shock protein Hsp10|Schiz... 60 5e-10
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.66
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.5
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.0
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 27 2.7
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 24 4.3
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.1
>SPCC550.06c |hsp10||mitochondrial heat shock protein
Hsp10|Schizosaccharomyces pombe|chr 3|||Manual
Length = 104
Score = 59.7 bits (138), Expect = 5e-10
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +1
Query: 145 AVKRLVPLLDRVLIKRAEAITKTAGGIVIPEKAQSKVLHGEVVAVGPGARKENG 306
+ K +VPLLDR+L++R +A TKTA GI +PEK+ K+ G V++VG G + G
Sbjct: 7 SAKSIVPLLDRILVQRIKADTKTASGIFLPEKSVEKLSEGRVISVGKGGYNKEG 60
Score = 42.3 bits (95), Expect = 9e-05
Identities = 19/39 (48%), Positives = 30/39 (76%)
Frame = +2
Query: 326 VSVGDKVLLPEYGGTKVSLENDEKEYHLFRESDILAKIE 442
V+VGD+VLLP YGG+ + + E+EY L+R+ ++LA I+
Sbjct: 67 VAVGDRVLLPAYGGSNIKV--GEEEYSLYRDHELLAIIK 103
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.66
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP GPPPPPP
Sbjct: 764 PPPPPGVAGAGPPPPPP 780
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 765 PPPPGVAGAGPPPPPPP 781
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
P P GGPPPPPP
Sbjct: 750 PVPPPAPIMGGPPPPPP 766
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +1
Query: 730 PPXXXXXXGGPPPPPP 777
PP G PPPPPP
Sbjct: 752 PPPAPIMGGPPPPPPP 767
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPP
Sbjct: 763 PPPPPPGVAGAGPPPPP 779
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.5
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 804 PXPPPPPXXPXPXXXXXXPP 863
P PPPPP P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPP 863
PP PPPPP P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 26.2 bits (55), Expect = 6.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP PPPPPP
Sbjct: 13 PPPPGFEPPSQPPPPPP 29
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPP 862
P P P PPPP P PP
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 27.5 bits (58), Expect = 2.7
Identities = 22/70 (31%), Positives = 36/70 (51%)
Frame = +2
Query: 362 GGTKVSLENDEKEYHLFRESDILAKIEN*MMVALTCDSNSVSLVVACANETLIWSCIFCE 541
GG+ S N +Y L+RE K+E+ MM SN V+ C N ++SC+F +
Sbjct: 857 GGSSNSA-NISSQYRLWRE-----KLESEMM---RVSSNDDYQVLVCENLVGLFSCVFVK 907
Query: 542 VLILSQLQYL 571
+ S+++ L
Sbjct: 908 NKLQSKIRML 917
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 23.8 bits (49), Expect(2) = 4.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 797 PXPXPPPPPXXPXXP 841
P P PPPPP P
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 21.0 bits (42), Expect(2) = 4.3
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 788 PXXPXPXPPPPP 823
P P PPPPP
Sbjct: 184 PSDYNPPPPPPP 195
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPPXXXP 875
PP PPP P P PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 26.2 bits (55), Expect = 6.1
Identities = 10/25 (40%), Positives = 10/25 (40%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPPXXXP 875
PP PPP P P PP P
Sbjct: 1208 PPVPPPSTAPPVPTPSAGLPPVPVP 1232
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,483,900
Number of Sequences: 5004
Number of extensions: 45832
Number of successful extensions: 313
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 438479610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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