Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N06
(876 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 36 0.057
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 35 0.099
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.13
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 34 0.13
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.40
SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033) 32 0.53
SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10) 32 0.70
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 0.92
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 2.8
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 3.7
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 3.7
SB_12997| Best HMM Match : DSL (HMM E-Value=1.4013e-45) 29 3.7
SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.) 25 3.8
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 29 4.9
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 29 4.9
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 29 4.9
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 4.9
SB_55936| Best HMM Match : Paramecium_SA (HMM E-Value=0.56) 29 6.5
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.5
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.6
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 28 8.6
SB_26814| Best HMM Match : 7tm_1 (HMM E-Value=0) 28 8.6
SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056) 28 8.6
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 28 8.6
SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013) 28 8.6
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPP 418
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 371 PPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAP 420
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 372 PPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPP 421
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 376 PSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 378 PPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 379 PPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPP 428
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 380 PPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPP 429
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 382 PPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPP 431
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P PP P P P PPPPP P P PP P
Sbjct: 383 PPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPP 432
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPPXXXP 875
PP PPPPP P P PP P
Sbjct: 366 PPPPPPPPPPPSPPPPPPPPPPSPP 390
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPPXXXXXXXXXXXXXXXXXPPXPXXXXXXPXXXPP 876
PPP PPPPPP PP P P PP
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPPPP 416
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPPPP P P P P
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPP 393
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPP P P P PP P
Sbjct: 367 PPPPPPPPPPSPPPPPPPPPPSPPPPPQP 395
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PP PP P P PP P
Sbjct: 368 PPPPPPPPPSPPPPPPPPPPSPPPPPQPP 396
Score = 29.9 bits (64), Expect = 2.8
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 725 PXPPXXXXXXXXXXXXXXXXXPXXPXPXPPPPPXXPXXPXXXXXPP 862
P PP P P P PPPPP P PP
Sbjct: 396 PPPPPPPPPPPPPPPPPPPPPPPAPPPPPPPPPPPPPALRLACAPP 441
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPPXXXXXXXXXXXXXXXXXPPXPXXXXXXPXXXPP 876
PPP P PPPP PP P P PP
Sbjct: 365 PPPPPPPPPPPPSPPPPPPPPPPSPPPPPQPPPPPPPPPPPPPPPPPPPP 414
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 34.7 bits (76), Expect = 0.099
Identities = 16/50 (32%), Positives = 16/50 (32%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPPXXXXXXXXXXXXXXXXXPPXPXXXXXXPXXXPP 876
PPP GGPPPPPP P P P PP
Sbjct: 153 PPPPIAPATGGPPPPPPIAPAATVPAPAVPLAAASPPPPSGGPPPPPPPP 202
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP GGPPPPPP
Sbjct: 140 PPPPIAPATGGPPPPPP 156
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPP 863
PP PPPPP P P PP
Sbjct: 197 PPPPPPPPPPPPPILELAAPP 217
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPP 862
P P P PPPPP P PP
Sbjct: 195 PPPPPPPPPPPPPPPILELAAPPPP 219
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 803 PXPPPPPXXPXXPXXXXXPP 862
P PPPPP P P PP
Sbjct: 108 PTPPPPPRAPETPSQAPSPP 127
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPPPP P P PP P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPPPPPP 711
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPPPP P P PP P
Sbjct: 686 PPPPPPPPPPPPPPPPQPSTPPPPPPSTP 714
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPPXXXP 875
PP PPPPP P P PP P
Sbjct: 691 PPPPPPPPPPPQPSTPPPPPPSTPP 715
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPPPP P P PP P
Sbjct: 466 PPPPPPPPPPPPPPPPPPPPPPFPPPPPP 494
Score = 34.3 bits (75), Expect = 0.13
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPPPP P P PP P
Sbjct: 468 PPPPPPPPPPPPPPPPPPPPFPPPPPPTP 496
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPPXXXP 875
PP PPPPP P P PP P
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFP 489
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 797 PXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P PPPPP P P PP P
Sbjct: 465 PPPPPPPPPPPPPPPPPPPPPPPFPP 490
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPPPP P P PP P
Sbjct: 464 PPPPPP-PPPPPPPPPPPPPPPPPPFPPP 491
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPP 862
P P P PPPPP P P PP
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPP 1181
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 797 PXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P PPPPP P P PP P
Sbjct: 1157 PPPPPPPPPPPPSSPSPPPPPPPPPP 1182
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPPXXXP 875
PP PPPPP P PP P
Sbjct: 1159 PPPPPPPPPPSSPSPPPPPPPPPPP 1183
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 797 PXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P PPPPP P PP P
Sbjct: 1159 PPPPPPPPPPSSPSPPPPPPPPPPPP 1184
>SB_2292| Best HMM Match : Extensin_2 (HMM E-Value=0.033)
Length = 867
Score = 32.3 bits (70), Expect = 0.53
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 797 PXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P PPPPP P P PP P
Sbjct: 213 PSPPPPPPPPSPSPPRPPPPPPPSPP 238
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPP 863
PP PPPPP P P PP
Sbjct: 212 PPSPPPPPPPPSPSPPRPPPP 232
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPPPP P P PP P
Sbjct: 208 PPRPPPSPPPPP-PPPSPSPPRPPPPPPP 235
>SB_37803| Best HMM Match : WH2 (HMM E-Value=1.8e-10)
Length = 514
Score = 31.9 bits (69), Expect = 0.70
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP GGPPPPPP
Sbjct: 363 PPPPPPPPVGGPPPPPP 379
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 364 PPPPPPPVGGPPPPPPP 380
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 25.0 bits (52), Expect(2) = 0.92
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 788 PXXPXPXPPPPP 823
P P P PPPPP
Sbjct: 375 PFAPPPPPPPPP 386
Score = 25.0 bits (52), Expect(2) = 0.92
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 797 PXPXPPPPPXXP 832
P P PPPPP P
Sbjct: 379 PPPPPPPPPPAP 390
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 31.1 bits (67), Expect = 1.2
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPP 863
PP PPPPP P P PP
Sbjct: 100 PPYPPPPPYPPPPNPPYPPPP 120
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P P PPPP P P PP P
Sbjct: 95 PPPPYPPYPPPPPYPPPPNPPYPPPPNAP 123
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPP 862
P P P PPPP P P PP
Sbjct: 159 PLYPPPPNPPPPNAPYPPPPYPPPP 183
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXPPXXXP 875
PP PPPP P P PP P
Sbjct: 158 PPLYPPPPNPPPPNAPYPPPPYPPP 182
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 797 PXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P PPPP P P PP P
Sbjct: 90 PNPPYPPPPYPPYPPPPPYPPPPNPP 115
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +3
Query: 726 PXPXXXXPXRGXXXXXXXXXXXXXXPPXPPPPPXXPXP 839
P P P G PP PPPPP P P
Sbjct: 957 PPPGGSAPPPGGGAPPLPPPPGGSAPPPPPPPPPPPPP 994
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 804 PXPPPPPXXPXPXXXXXXPPXXXP 875
P PPPPP P P PP P
Sbjct: 314 PPPPPPPPPPPPGDGGAPPPPPPP 337
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 320 PPPPPPGDGGAPPPPPP 336
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP GG PPPPP
Sbjct: 319 PPPPPPPGDGGAPPPPP 335
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 200 PPPPPGFPGGAPPPPPP 216
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXPXXXXXPP 862
P P PPPPP P P PP
Sbjct: 190 PMAGMPPPPPPPPPPGFPGGAPPPP 214
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 797 PXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P PPPPP P PP P
Sbjct: 196 PPPPPPPPPGFPGGAPPPPPPPFGAP 221
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP GG PPPPP
Sbjct: 199 PPPPPPGFPGGAPPPPP 215
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 665 PPPPGGQAGGAPPPPPP 681
Score = 29.5 bits (63), Expect = 3.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 689 PPPPPPIGGGAPPPPPP 705
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP GG PPPPP
Sbjct: 664 PPPPPGGQAGGAPPPPP 680
>SB_12997| Best HMM Match : DSL (HMM E-Value=1.4013e-45)
Length = 239
Score = 29.5 bits (63), Expect = 3.7
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +3
Query: 201 YNQNCRRHCHPREGSIQGFTRRSSSGR 281
Y +CR HC P E +QG +GR
Sbjct: 167 YGDDCRIHCVPTESDVQGHYSCDGAGR 193
>SB_45157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2870
Score = 25.0 bits (52), Expect(2) = 3.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 788 PXXPXPXPPPPP 823
P P P PPPPP
Sbjct: 916 PEPPPPLPPPPP 927
Score = 22.6 bits (46), Expect(2) = 3.8
Identities = 9/26 (34%), Positives = 9/26 (34%)
Frame = +2
Query: 797 PXPXPPPPPXXPXXPXXXXXPPXXXP 874
P P PP P P PP P
Sbjct: 949 PTPPPPTSALPPPIPATQVPPPPLPP 974
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 864 PRRPPPPPPPPPPPPPPP 881
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 867 PPPPPPPPPPPPPPPPPP 884
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 868 PPPPPPPPPPPPPPPPPP 885
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 54 PPPPPPPPPPPPPPPPPP 71
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXP 860
PP PPPPP P P P
Sbjct: 56 PPPPPPPPPPPPPPPPSSSP 75
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXP 860
PP PPPPP P P P
Sbjct: 59 PPPPPPPPPPPPPSSSPSRP 78
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 3 PPPPPPGPPPPPSAPSGP 20
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PP GGPPPPPP
Sbjct: 360 PPGRAPQPLGGPPPPPP 376
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 65 PTLPPPPPPPPPPLPPPP 82
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 289 PTLPPPPPPPPPPLPPPP 306
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 102 PPPPPPPPPPPPPPPPPP 119
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 103 PPPPPPPPPPPPPPPPPP 120
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/49 (28%), Positives = 14/49 (28%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPPXXXXXXXXXXXXXXXXXPPXPXXXXXXPXXXP 873
PPP PPPPPP PP P P P
Sbjct: 104 PPPPPPPPPPPPPPPPPITLHHEQHVVSHVMHPAPPPPPPPPPAPCMPP 152
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 1308 PESPPPPPPPPPPPPPPP 1325
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 1311 PPPPPPPPPPPPPPPLPP 1328
Score = 29.1 bits (62), Expect = 4.9
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 788 PXXPXPXPPPPPXXPXXP 841
P P P PPPPP P P
Sbjct: 1313 PPPPPPPPPPPPPLPPTP 1330
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXP 860
PP PPPPP P P P
Sbjct: 1311 PPPPPPPPPPPPPPPLPPTP 1330
>SB_55936| Best HMM Match : Paramecium_SA (HMM E-Value=0.56)
Length = 581
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -2
Query: 293 RAPGPTATTSPCKTLD*AFSGMTMPPA 213
R P P + +PCKT+ +FS + P+
Sbjct: 179 RTPSPLLSATPCKTITQSFSNVAFSPS 205
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 374 PPPPPPPTNGPPPPPPP 390
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 384 PPPPPPPTNGPPPPPPP 400
Score = 28.7 bits (61), Expect = 6.5
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 394 PPPPPPPTNGPPPPPPP 410
>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXP 860
PP PPPPP P P P
Sbjct: 142 PPPPPPPPSPPPPCHPPALP 161
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXP 860
PP PPPPP P P P
Sbjct: 79 PPPPPPPPPPPPPPPGAKKP 98
>SB_26814| Best HMM Match : 7tm_1 (HMM E-Value=0)
Length = 594
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = -3
Query: 157 IVLLHWPFRFLI 122
IVLLHWP+RFL+
Sbjct: 177 IVLLHWPWRFLL 188
>SB_14625| Best HMM Match : Cytadhesin_P30 (HMM E-Value=0.056)
Length = 245
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PPP G PPPPPP
Sbjct: 215 PPPMGGPPGGYPPPPPP 231
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 801 PPXPPPPPXXPXPXXXXXXP 860
PP PPPPP P P P
Sbjct: 280 PPPPPPPPPPPPPPPGAKKP 299
>SB_10535| Best HMM Match : Extensin_2 (HMM E-Value=0.013)
Length = 392
Score = 28.3 bits (60), Expect = 8.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 727 PPPXXXXXXGGPPPPPP 777
PP GGPPPPPP
Sbjct: 272 PPGRAPQPLGGPPPPPP 288
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,425,139
Number of Sequences: 59808
Number of extensions: 386218
Number of successful extensions: 4194
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1101
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2419
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2490695009
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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