Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_N06
         (876 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   0.72 
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   2.3  
DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domai...    25   3.0  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    25   4.0  
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          24   7.0  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 8/13 (61%), Positives = 8/13 (61%)
 Frame = +3

Query: 801 PPXPPPPPXXPXP 839
           PP PPPPP    P
Sbjct: 784 PPPPPPPPSSLSP 796



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 754 GGPPPPPP 777
           G PPPPPP
Sbjct: 781 GSPPPPPP 788



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 801 PPXPPPPP 824
           PP PPPPP
Sbjct: 783 PPPPPPPP 790



 Score = 23.0 bits (47), Expect(2) = 0.72
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = +2

Query: 797 PXPXPPPPP 823
           P P PPPPP
Sbjct: 783 PPPPPPPPP 791



 Score = 22.2 bits (45), Expect(2) = 0.72
 Identities = 8/19 (42%), Positives = 8/19 (42%)
 Frame = +2

Query: 803 PXPPPPPXXPXXPXXXXXP 859
           P PPPPP     P     P
Sbjct: 784 PPPPPPPPSSLSPGGVPRP 802


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = +3

Query: 801 PPXPPPPPXXPXPXXXXXXPPXXXP 875
           PP PPPPP    P       P   P
Sbjct: 582 PPAPPPPPPMGPPPSPLAGGPLGGP 606



 Score = 23.4 bits (48), Expect = 9.2
 Identities = 7/7 (100%), Positives = 7/7 (100%)
 Frame = +1

Query: 757 GPPPPPP 777
           GPPPPPP
Sbjct: 529 GPPPPPP 535


>DQ370045-1|ABD18606.1|  285|Anopheles gambiae putative TIL domain
           protein protein.
          Length = 285

 Score = 25.0 bits (52), Expect = 3.0
 Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
 Frame = +3

Query: 141 QCSKT-IGSSSGPCPDQKS*SYNQNCRRHCHPREGSIQGFTRRSSSG 278
           +C K  + S   PCP +   S    C+  C P     +GF R +  G
Sbjct: 25  RCPKNEVYSCCAPCPQKACISEAVKCQTSCLPGCVCKKGFVRETQFG 71


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +2

Query: 347 LLPEYGGTKVSLENDEKEYHLFRESD 424
           LL E  GT+V  E  E+  +L RES+
Sbjct: 158 LLREVAGTRVYDERKEESMNLLRESE 183


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 23.8 bits (49), Expect = 7.0
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = -2

Query: 116 NSKAKNMSTDERCSKFAGI*NQQHLNLKDS 27
           NS+A NMS +   S  +     Q+LNL  S
Sbjct: 84  NSRASNMSPESSASDQSAAYTLQNLNLSSS 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,177
Number of Sequences: 2352
Number of extensions: 12019
Number of successful extensions: 53
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93853377
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)