Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_N05
(860 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.46
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.46
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.46
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.60
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.4
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 3.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 3.2
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 5.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 5.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 28 7.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 28 7.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 28 7.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 28 9.8
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 9.8
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 28 9.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPPG PP P PPPPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
GG PPPP PP P PPPPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPP------PPPPP 748
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPPG PP P PPPPP
Sbjct: 762 PPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
GG PPPP PP P PPPPP
Sbjct: 724 GGPPPPPPPGGLPPITGGPP------PPPPP 748
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.46
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPPG PP P PPPPP
Sbjct: 345 PPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 28.7 bits (61), Expect = 5.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +1
Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
GG PPPP PP P PPPPP
Sbjct: 307 GGPPPPPPPGGLPPITGGPP------PPPPP 331
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.60
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPPG PP P+ PPPP
Sbjct: 719 PPPPGVGPPPPQGIPPMGFDPNKPPPP 745
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 703 GXXPPPP--GKKXPPXXXXXPLXXXXXPPPPP 792
G PPPP G PP P PPPPP
Sbjct: 253 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 284
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
G PPP G PP P PPPP
Sbjct: 270 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 300
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPP PP PL PPPPP
Sbjct: 237 PPPP----PPPKGSPPLAGSGSPPPPP 259
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 703 GXXPPPP--GKKXPPXXXXXPLXXXXXPPPPP 792
G PPPP G PP P PPPPP
Sbjct: 274 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 305
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
G PPP G PP P PPPP
Sbjct: 291 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 321
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPP PP PL PPPPP
Sbjct: 258 PPPP----PPPKGSPPLAGSGSPPPPP 280
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +1
Query: 703 GXXPPPP--GKKXPPXXXXXPLXXXXXPPPPP 792
G PPPP G PP P PPPPP
Sbjct: 259 GSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPP 290
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
G PPP G PP P PPPP
Sbjct: 276 GSPPPPPTGSPPPPPAGGSPPPPRAGSPPPP 306
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPP PP PL PPPPP
Sbjct: 243 PPPP----PPPKGSPPLAGSGSPPPPP 265
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPP P P+ PPPPP
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPP 635
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.5 bits (63), Expect = 3.2
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPP P P+ PPPPP
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPP 461
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPP + P P PPPPP
Sbjct: 467 PPPPSRIPNPSPSPQPAEVSKSPPPPP 493
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.3
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPP + P P PPPPP
Sbjct: 474 PPPPSRIPNPSPSPQPAEVSKSPPPPP 500
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/30 (43%), Positives = 14/30 (46%)
Frame = +1
Query: 703 GXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
G PPPPG P P+ PPPPP
Sbjct: 72 GFIPPPPGPGGIP--PPPPMFAGGIPPPPP 99
Score = 28.3 bits (60), Expect = 7.4
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +1
Query: 700 GGXXPPPP--GKKXPPXXXXXPLXXXXXPPPPP 792
GG PPPP G PP P+ PPPPP
Sbjct: 92 GGIPPPPPMMGGIPPPP----PMFGAPPPPPPP 120
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPP PP P+ PPPPP
Sbjct: 1339 PPPPPPPPPPSDDLTPVPPP--PPPPP 1363
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 758 PSXSXXPPPPPP 793
PS PPPPPP
Sbjct: 1336 PSPPPPPPPPPP 1347
Score = 23.0 bits (47), Expect(2) = 5.8
Identities = 9/24 (37%), Positives = 9/24 (37%)
Frame = +2
Query: 776 PPPPPPXXXXKKKKXXXXXXXXPP 847
PPPPPP K PP
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPPP 1379
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 712 PPPPGKKXPPXXXXXPLXXXXXPPPPP 792
PPPPG P PL PPPPP
Sbjct: 470 PPPPG----PPSSLLPLINTNAPPPPP 492
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 703 GXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
G PPPP PP P PPPPP
Sbjct: 294 GMWPPPP--PPPPGRTPGPPGMPGMPPPPP 321
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.3 bits (60), Expect = 7.4
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +1
Query: 703 GXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
G PPPP PP P PPPPP
Sbjct: 304 GMWPPPP--PPPPGRTPGPPGMPGMPPPPP 331
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
GG PPPP PP PPPPP
Sbjct: 670 GGFMPPPP--PPPPMPGDLSSLLAAAPPPPP 698
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 27.9 bits (59), Expect = 9.8
Identities = 12/29 (41%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +1
Query: 712 PPPPGKKXP--PXXXXXPLXXXXXPPPPP 792
PPPP + P P P+ PPPPP
Sbjct: 549 PPPPREPTPREPTPEPEPVREPTPPPPPP 577
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 700 GGXXPPPPGKKXPPXXXXXPLXXXXXPPPPP 792
GG PPPP PP PPPPP
Sbjct: 670 GGFMPPPP--PPPPMPGDLSSLLAAAPPPPP 698
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,022,038
Number of Sequences: 27780
Number of extensions: 221152
Number of successful extensions: 1591
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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