Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_M24
(910 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.005
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 36 0.006
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.032
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 30 0.52
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.52
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.52
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 2.1
SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase Ppk38|Schizo... 27 2.8
SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr ... 27 3.7
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXS 874
PP P P P S P P +PP P P PPP P S
Sbjct: 1699 PPQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAPPPPLPAS 1738
Score = 33.5 bits (73), Expect = 0.042
Identities = 19/44 (43%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAP--XSXPXSPPPPXXPXXXXPP-PSP 868
P PP P P+ P P SAP + P S PPP P P P+P
Sbjct: 1705 PTPP--PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/38 (36%), Positives = 17/38 (44%)
Frame = +2
Query: 764 PXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
P + +P P P S P PPP P PP +P P
Sbjct: 1699 PPQMSAPTPPPPPMSVP--PPPSAPPMPAGPPSAPPPP 1734
Score = 29.1 bits (62), Expect = 0.91
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXP 856
PP +P SP P S +PPPP P P
Sbjct: 1355 PPVRPAVPTSPKPQIPDSSNVHAPPPPVQPMNAMP 1389
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/42 (35%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 755 PXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPS-PXSP 877
P P P SA +P PP P PPPS P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/55 (32%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSA-PXSXPXSPPPPXXPXXXXPPPSPXSPHXXXXXSLLP 907
P P P P P P S P + P P P P PPS +P +L P
Sbjct: 1470 PAPSSAPAP---PAPVSQLPPAVPNVPVPSMIPSVAQQPPSSVAPATAPSSTLPP 1521
Score = 27.1 bits (57), Expect = 3.7
Identities = 14/45 (31%), Positives = 15/45 (33%), Gaps = 1/45 (2%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPP-XXPXXXXPPPSPXSP 877
P P P+ S P PPPP P PP P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.3 bits (80), Expect = 0.006
Identities = 15/42 (35%), Positives = 16/42 (38%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
P P P+ P P P PPPP PPP P P
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.5 bits (73), Expect = 0.042
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 5/49 (10%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAP-----XSXPXSPPPPXXPXXXXPPPSPXSP 877
P PP P +P P P P PPPP PPP P P
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.9 bits (69), Expect = 0.13
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
PP P + P P AP P PP P PPP P P
Sbjct: 732 PPPPPPAVIVPTPAPAPI-----PVPPPAPIMGGPPPPPPPP 768
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.032
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 2/47 (4%)
Frame = +2
Query: 734 TXXXPXPPXQPXPLXSPXPXSAPXSXPXSPP--PPXXPXXXXPPPSP 868
T P PP P P SAP S P P PP P PP P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +2
Query: 764 PXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXS 874
P P P SAP S P S PP PP P S
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPS 452
Score = 30.7 bits (66), Expect = 0.30
Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 752 PPXQPX-PLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
PP P P+ P P P + P P P P P P+P +P
Sbjct: 447 PPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP--PAPAPAPAAP 487
Score = 30.3 bits (65), Expect = 0.39
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSP 868
P P P +P P P +PP P P PPP+P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPPLP--PAAPAPPPAP 480
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +2
Query: 734 TXXXPXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
T P PP P S P PPP PP SP P
Sbjct: 227 TSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSP 868
P PP P P SAP S PPP PP+P
Sbjct: 352 PLPPQGRSAPPPPPPRSAP-STGRQPPPLSSSRAVSNPPAP 391
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPP 832
PP P P P P P S P PPPP
Sbjct: 5 PPGNPPP-PPPPPGFEPPSQPPPPPPP 30
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 812 PXSPPPPXXPXXXXPPPSPXSP 877
P +PPPP P PP P P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPP 27
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 800 PXSXPXSPPPPXXPXXXXPPPSP 868
P + P PPPP PPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPP 28
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/27 (44%), Positives = 12/27 (44%), Gaps = 2/27 (7%)
Frame = +2
Query: 794 SAPXSXPXSPPPP--XXPXXXXPPPSP 868
S P P PPPP P PPP P
Sbjct: 3 SLPPGNPPPPPPPPGFEPPSQPPPPPP 29
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect = 0.52
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPP-PXXPXXXXPPPSPXSP 877
P P P P P +P S P P P P PPP +P
Sbjct: 166 PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAP 210
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
PP P S P S + P P P PP P +P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/45 (33%), Positives = 17/45 (37%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSPH 880
P PP P P S P + S P S PP SP P+
Sbjct: 196 PMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSESPKFPN 240
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPP-PPXXPXXXXPPPSPXSP 877
PP P P P S P P PP P P PS P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPP 166
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/44 (27%), Positives = 15/44 (34%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
P P P P P ++ P PPP P +P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/41 (29%), Positives = 15/41 (36%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSP 868
P P + P+ S P A + P PP PP P
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.52
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
PP P PL S+P S P PP P SP +P
Sbjct: 966 PPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAP 1007
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/44 (34%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPP-PSPXS 874
P P P P+ P + P P PP P PP P+P S
Sbjct: 1134 PVPSGAP-PVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = +2
Query: 755 PXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXSP 877
P P P + P AP S P P PPPS P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/40 (32%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPP-PSP 868
PP + P+ P P P + PP P PP P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPP-PSP 868
P P P P+ P + P P PP P PP P+P
Sbjct: 1115 PAPSGAP-PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 1/42 (2%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPP-PSP 868
P P P+ +P P P + PP P PP P P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +2
Query: 746 PXPPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSPXS 874
P P P+ P P P PP P PP P S
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/39 (30%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Frame = +2
Query: 755 PXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPP-PSP 868
P P P +P + P +PPP P P P+P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -2
Query: 876 GEXGEGGGXXXXGXXGGGGEXGXEXGAXXGXGEXRGXGWXGGXG 745
G G GG G GG G GA G G RG G GG G
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRG-GRG-GARGGRG 58
>SPCP1E11.02 |ppk38||Ark1/Prk1 family protein kinase
Ppk38|Schizosaccharomyces pombe|chr 3|||Manual
Length = 650
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/39 (33%), Positives = 14/39 (35%)
Frame = +2
Query: 752 PPXQPXPLXSPXPXSAPXSXPXSPPPPXXPXXXXPPPSP 868
P Q P AP S PPPP P P +P
Sbjct: 404 PSTQKLPSNFRVTQGAPPSHTYGPPPPVQPKPKISPTTP 442
>SPAC11E3.02c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1237
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 184 QLYMSVVIGEY-ETAIAKRSEYLKEKKGEVIXEAVKRLIE 300
Q+++++V+ Y A+ EYL+EK I + K ++E
Sbjct: 556 QIFINIVLPNYIRAALVVAKEYLREKANADINDLTKDMLE 595
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,963,010
Number of Sequences: 5004
Number of extensions: 30724
Number of successful extensions: 237
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 182
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 460503700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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