Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M24
         (910 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       23   2.9  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    22   6.7  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    22   6.7  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    22   6.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 14/42 (33%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
 Frame = +2

Query: 755 PXQPXPLXSPXPXSAPXSXPX-SPP-PPXXPXXXXPPPSPXS 874
           P    P   P P  +P +    SPP P   P    PP +P S
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPS 57


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 223 AIAKRSEYLKEKKGEVIXEAVKRLIEN 303
           A+A   +   +K+ EVI + +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 223 AIAKRSEYLKEKKGEVIXEAVKRLIEN 303
           A+A   +   +K+ EVI + +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +1

Query: 223 AIAKRSEYLKEKKGEVIXEAVKRLIEN 303
           A+A   +   +K+ EVI + +K L+EN
Sbjct: 71  ALATDCKKCTDKQREVIKKVIKFLVEN 97


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,772
Number of Sequences: 438
Number of extensions: 3470
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29509116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)