Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_M22
(893 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine aminotran... 148 3e-35
BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine aminotran... 148 3e-35
BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine aminotran... 148 3e-35
BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine aminotran... 148 3e-35
AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine aminotran... 148 3e-35
AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine aminotran... 148 3e-35
AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine aminotran... 148 3e-35
AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine aminotran... 148 3e-35
BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine aminotran... 146 7e-35
BC037878-1|AAH37878.1| 421|Homo sapiens solute carrier family 3... 31 7.5
AL713868-1|CAI14569.1| 490|Homo sapiens solute carrier family 3... 31 7.5
AL122008-2|CAI22850.1| 421|Homo sapiens solute carrier family 3... 31 7.5
AL122008-1|CAI22849.1| 490|Homo sapiens solute carrier family 3... 31 7.5
AK095031-1|BAC04479.1| 490|Homo sapiens protein ( Homo sapiens ... 31 7.5
>BT006840-1|AAP35486.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 148 bits (358), Expect = 3e-35
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>BC018129-1|AAH18129.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 148 bits (358), Expect = 3e-35
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>BC004863-1|AAH04863.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 148 bits (358), Expect = 3e-35
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>BC000971-1|AAH00971.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 148 bits (358), Expect = 3e-35
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>AY131232-1|AAN71736.1| 370|Homo sapiens phosphoserine
aminotransferase protein.
Length = 370
Score = 148 bits (358), Expect = 3e-35
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>AL353594-2|CAI16883.1| 324|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 324
Score = 148 bits (358), Expect = 3e-35
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>AL353594-1|CAI16882.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 148 bits (358), Expect = 3e-35
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>AF113132-1|AAD42052.1| 324|Homo sapiens phosphoserine
aminotransferase protein.
Length = 324
Score = 148 bits (358), Expect = 3e-35
Identities = 75/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS+LE SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>BC016645-1|AAH16645.1| 370|Homo sapiens phosphoserine
aminotransferase 1 protein.
Length = 370
Score = 146 bits (355), Expect = 7e-35
Identities = 74/154 (48%), Positives = 95/154 (61%), Gaps = 2/154 (1%)
Frame = +3
Query: 141 KVFNFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLD 320
+V NFG GPAKLP V I+ EL +++ GIS++E SHRSS + K+ +++VR LL
Sbjct: 6 QVVNFGPGPAKLPHSVLLEIQKELLDYKGVGISVVEMSHRSSDFAKIINNTENLVRELLA 65
Query: 321 VPDNYKVXXXXXXXXXXXXXVPLNLIS-RTG-TADYVVTGAWSXXXXXXXXXYGKVNLVL 494
VPDNYKV VPLNLI + G ADYVVTGAWS +G +N+V
Sbjct: 66 VPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVH 125
Query: 495 PPTDKYEDIPDQTKWNLDPNASYVHICTNETIHG 596
P Y IPD + WNL+P+ASYV+ C NET+HG
Sbjct: 126 PKLGSYTKIPDPSTWNLNPDASYVYYCANETVHG 159
Score = 56.4 bits (130), Expect = 1e-07
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Frame = +1
Query: 595 GVEFDFIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLK---RS 765
GVEFDFIPD KG L+ DMSSN +SK VDVSK K +GV + +++
Sbjct: 159 GVEFDFIPDVKGAVLVCDMSSNFLSKPVDVSKFGVIFAGAQKNVGSAGVTVVIVRDDLLG 218
Query: 766 FESGSTDMXLFIXLDSYYNRINLNTPPMLALYI 864
F L + + N NTPP ++Y+
Sbjct: 219 FALRECPSVLEYKVQA-GNSSLYNTPPCFSIYV 250
>BC037878-1|AAH37878.1| 421|Homo sapiens solute carrier family 35,
member F3 protein.
Length = 421
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 151 LNTLDIFTYLFI*LIPTLHYFIKRHYRSQTCRSTMSNLKGFPIV 20
L+ L +F LFI IP + YF K Y S NL GF ++
Sbjct: 268 LSILGVFNILFITCIPIILYFTKVEYWSSFDDIPWGNLCGFSVL 311
>AL713868-1|CAI14569.1| 490|Homo sapiens solute carrier family 35,
member F3 protein.
Length = 490
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 151 LNTLDIFTYLFI*LIPTLHYFIKRHYRSQTCRSTMSNLKGFPIV 20
L+ L +F LFI IP + YF K Y S NL GF ++
Sbjct: 337 LSILGVFNILFITCIPIILYFTKVEYWSSFDDIPWGNLCGFSVL 380
>AL122008-2|CAI22850.1| 421|Homo sapiens solute carrier family 35,
member F3 protein.
Length = 421
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 151 LNTLDIFTYLFI*LIPTLHYFIKRHYRSQTCRSTMSNLKGFPIV 20
L+ L +F LFI IP + YF K Y S NL GF ++
Sbjct: 268 LSILGVFNILFITCIPIILYFTKVEYWSSFDDIPWGNLCGFSVL 311
>AL122008-1|CAI22849.1| 490|Homo sapiens solute carrier family 35,
member F3 protein.
Length = 490
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 151 LNTLDIFTYLFI*LIPTLHYFIKRHYRSQTCRSTMSNLKGFPIV 20
L+ L +F LFI IP + YF K Y S NL GF ++
Sbjct: 337 LSILGVFNILFITCIPIILYFTKVEYWSSFDDIPWGNLCGFSVL 380
>AK095031-1|BAC04479.1| 490|Homo sapiens protein ( Homo sapiens
cDNA FLJ37712 fis, clone BRHIP2018369. ).
Length = 490
Score = 30.7 bits (66), Expect = 7.5
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = -2
Query: 151 LNTLDIFTYLFI*LIPTLHYFIKRHYRSQTCRSTMSNLKGFPIV 20
L+ L +F LFI IP + YF K Y S NL GF ++
Sbjct: 337 LSILGVFNILFITCIPIILYFTKVEYWSSFDDIPWGNLCGFSVL 380
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,660,964
Number of Sequences: 237096
Number of extensions: 2389623
Number of successful extensions: 3930
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 3813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3912
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11492727354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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