Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M22
         (893 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical pr...   128   5e-30
Z82270-3|CAB63205.1|  667|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical pr...    29   5.9  
Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical pr...    29   5.9  
AL032653-3|CAA21713.1|  861|Caenorhabditis elegans Hypothetical ...    29   5.9  

>Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical
           protein F26H9.5 protein.
          Length = 370

 Score =  128 bits (309), Expect = 5e-30
 Identities = 62/149 (41%), Positives = 83/149 (55%)
 Frame = +3

Query: 150 NFGAGPAKLPEEVYEIIKNELTNFENSGISLLETSHRSSTYMKLNVEIQDVVRNLLDVPD 329
           NF AGPAKLPEEV   ++ E  NF N G+S++E SHRS  +  L  E   ++R L++VPD
Sbjct: 9   NFAAGPAKLPEEVLLKMQEEQLNFNNLGVSVIEMSHRSKEFGALLNETISLIRELMNVPD 68

Query: 330 NYKVXXXXXXXXXXXXXVPLNLISRTGTADYVVTGAWSXXXXXXXXXYGKVNLVLPPTDK 509
           N+++             +PLNL      ADY+VTGAWS         Y  V  V  P+  
Sbjct: 69  NFEILFMQGGGTGQFAAIPLNLKGDHEHADYIVTGAWSSKAADEAGKYINVKKVFQPSKP 128

Query: 510 YEDIPDQTKWNLDPNASYVHICTNETIHG 596
           Y  +PDQ  W  D  A+Y++ C NET+HG
Sbjct: 129 YVTVPDQENWVHDEKAAYLYYCANETVHG 157



 Score = 34.7 bits (76), Expect = 0.090
 Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
 Frame = +1

Query: 595 GVEFD-FIPDTKGVPLIADMSSNIMSKKVDVSKVWGDICWCSKEYWYSGVXLSLLKRSF- 768
           G+EF    P++  VPL+AD+SSN M++  D            K    +G+ + ++++   
Sbjct: 157 GIEFTPTAPESHNVPLVADVSSNFMARPFDFKDHGVVFGGAQKNLGAAGLTIVIVRKDLI 216

Query: 769 -ESGSTDMXLFIXLDSYYNRINLNTPPMLALY 861
            +  +    +F   +   N    NTPP   +Y
Sbjct: 217 GKQQAITPSVFSYKEMIANNSLYNTPPTGGIY 248


>Z82270-3|CAB63205.1|  667|Caenorhabditis elegans Hypothetical
           protein F53H2.3 protein.
          Length = 667

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/49 (28%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
 Frame = -1

Query: 722 SFEHQHISPQTFETSTFFDIMFEDISAIKGT-----PFVSGMKSNSTPM 591
           + E + +SP    T+  FD +  D    K T     P + G+ S+ +PM
Sbjct: 519 NLEQKAVSPSENSTAALFDAVLADFGGFKATSANLNPLLPGISSSQSPM 567


>Z74037-2|CAD36492.1|  441|Caenorhabditis elegans Hypothetical
           protein F57B7.1b protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 603 FNTHVLFH*YKYVHMKHWDQGSILSDQVCLHIYLSVVA 490
           + TH  F  +K+ H KHW     L   +  H +LS+VA
Sbjct: 86  YTTHYSFVAFKFCHPKHWSYSWALF--LIAHAHLSLVA 121


>Z74037-1|CAA98492.1|  510|Caenorhabditis elegans Hypothetical
           protein F57B7.1a protein.
          Length = 510

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = -3

Query: 603 FNTHVLFH*YKYVHMKHWDQGSILSDQVCLHIYLSVVA 490
           + TH  F  +K+ H KHW     L   +  H +LS+VA
Sbjct: 86  YTTHYSFVAFKFCHPKHWSYSWALF--LIAHAHLSLVA 121


>AL032653-3|CAA21713.1|  861|Caenorhabditis elegans Hypothetical
           protein Y54E5B.2 protein.
          Length = 861

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/58 (27%), Positives = 31/58 (53%)
 Frame = +1

Query: 703 ICWCSKEYWYSGVXLSLLKRSFESGSTDMXLFIXLDSYYNRINLNTPPMLALYIGSSL 876
           I + SK YW S    S +  +  SGS++  + + LD + +  + N   +L +++G +L
Sbjct: 558 IDFLSKNYWISNAHSSPIVAA--SGSSNYLVTVSLDGHLSISDGNLKRILTIFVGENL 613


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,251,236
Number of Sequences: 27780
Number of extensions: 402662
Number of successful extensions: 1067
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1025
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2265843888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)