Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_M21
(937 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.8
SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 30 2.3
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 30 2.3
SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011) 30 2.3
SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11) 30 3.1
SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.1
SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48) 30 3.1
SB_59302| Best HMM Match : Collagen (HMM E-Value=0) 29 4.1
SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30) 29 4.1
SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08) 29 5.4
SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_54784| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 29 5.4
SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33) 29 5.4
SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 7.1
SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1) 29 7.1
SB_26475| Best HMM Match : Cadherin (HMM E-Value=0.009) 29 7.1
SB_18739| Best HMM Match : YhhN (HMM E-Value=7.3) 29 7.1
SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53) 28 9.4
SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05) 28 9.4
SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5) 28 9.4
SB_11994| Best HMM Match : ERM (HMM E-Value=0.28) 28 9.4
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26) 28 9.4
SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_16220| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.4
SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06) 28 9.4
SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1) 28 9.4
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.7 bits (66), Expect = 1.8
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGS 464
P PPPPP PPP GS
Sbjct: 874 PPPPPPPPPPPPASSTGS 891
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP + G P
Sbjct: 869 PPPPPPPPPPPPPPPPPASSTGSTP 893
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPG 476
P PPPPP PPP PG
Sbjct: 873 PPPPPPPPPPPPPASSTGSTPG 894
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 867 PPPPPPPPPPPP 878
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 868 PPPPPPPPPPPP 879
>SB_43066| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 81
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGP 473
P PPPPP PPP S P
Sbjct: 55 PPPPPPPPPPPPPPPPPSSSP 75
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 54 PPPPPPPPPPPP 65
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 399 TYXXPXPPPPPXXPPPXXXXGS 464
T P PPPPP PPP G+
Sbjct: 66 TLPPPPPPPPPPLPPPPPSGGN 87
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 406 PXPPXXPPXPPPXPXXXXVPGARG 477
P PP PP PPP P P G
Sbjct: 62 PIPPTLPPPPPPPPPPLPPPPPSG 85
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 30.3 bits (65), Expect = 2.3
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +3
Query: 399 TYXXPXPPPPPXXPPPXXXXGS 464
T P PPPPP PPP G+
Sbjct: 290 TLPPPPPPPPPPLPPPPPSGGN 311
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +1
Query: 406 PXPPXXPPXPPPXPXXXXVPGARG 477
P PP PP PPP P P G
Sbjct: 286 PIPPTLPPPPPPPPPPLPPPPPSG 309
>SB_44647| Best HMM Match : C_tripleX (HMM E-Value=0.00011)
Length = 812
Score = 30.3 bits (65), Expect = 2.3
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +3
Query: 387 SVCSTYXXPXPPPPPXXPPPXXXXGSGGPGXXP 485
S C +Y P PP PP PP P P
Sbjct: 516 SCCGSYPAPQPPSPPAPPPKPAPPPRSPPAAAP 548
>SB_55393| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1597
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 345 IKLCKSIHVNKIRMSVCSTYXXPXPPPPPXXPPP 446
I + SI + + + + + P PPPPP PPP
Sbjct: 663 ISVNPSIPIQILPIPIQTMVPPPPPPPPPPPPPP 696
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP S P P
Sbjct: 687 PPPPPPPPPPPPPPPQPSTPPPPPP 711
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP P P
Sbjct: 683 PPPPPPPPPPPPPPPPPPPQPSTPP 707
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP P P
Sbjct: 686 PPPPPPPPPPPPPPPPQPSTPPPPP 710
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 406 PXPPXXPPXPPPXPXXXXVP 465
P PP PP PPP P P
Sbjct: 687 PPPPPPPPPPPPPPPQPSTP 706
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +1
Query: 397 VLTPXPPXXPPXPPPXPXXXXVP 465
++ P PP PP PPP P P
Sbjct: 681 MVPPPPPPPPPPPPPPPPPPPQP 703
>SB_16697| Best HMM Match : Collagen (HMM E-Value=4.2e-11)
Length = 1903
Score = 29.9 bits (64), Expect = 3.1
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 402 YXXPXPPPPPXXPPPXXXXGSGGPG 476
Y P PPPPP PP G PG
Sbjct: 1659 YPAPPPPPPPAPGPPGPDGPMGLPG 1683
>SB_53582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 393
Score = 29.9 bits (64), Expect = 3.1
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +3
Query: 393 CSTYXXPXPPPPPXXPPP 446
C+ P PPPPP PPP
Sbjct: 100 CAPPPPPPPPPPPPPPPP 117
Score = 29.5 bits (63), Expect = 4.1
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 393 CSTYXXPXPPPPPXXPPP 446
C P PPPPP PPP
Sbjct: 99 CCAPPPPPPPPPPPPPPP 116
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 107 PPPPPPPPPPPP 118
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 108 PPPPPPPPPPPP 119
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 109 PPPPPPPPPPPP 120
>SB_34481| Best HMM Match : Extensin_2 (HMM E-Value=0.48)
Length = 341
Score = 29.9 bits (64), Expect = 3.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 417 PPPPPXXPPPXXXXGSGGPGXXP 485
PPPPP PPP G P P
Sbjct: 314 PPPPPPPPPPPPGDGGAPPPPPP 336
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP G GG P
Sbjct: 314 PPPPPPPPPPPP----GDGGAPPPP 334
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 417 PPPPPXXPPPXXXXGSGGPGXXP 485
PPPPP PPP G+ P P
Sbjct: 315 PPPPPPPPPPPGDGGAPPPPPPP 337
>SB_59302| Best HMM Match : Collagen (HMM E-Value=0)
Length = 993
Score = 29.5 bits (63), Expect = 4.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +3
Query: 384 MSVCSTYXXPXPPPPPXXPPPXXXXGSGGPGXXP 485
+S C T P PPP PPP G GP P
Sbjct: 23 LSCCET--PPPPPPYEAPPPPPGPPGPDGPPGFP 54
>SB_19504| Best HMM Match : FH2 (HMM E-Value=1.2e-30)
Length = 739
Score = 29.5 bits (63), Expect = 4.1
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +3
Query: 417 PPPPPXXPPPXXXXGSGGPGXXP 485
PPPPP PPP G+ P P
Sbjct: 195 PPPPPPPPPPGFPGGAPPPPPPP 217
>SB_47784| Best HMM Match : Ank (HMM E-Value=1.4e-08)
Length = 593
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXPL 488
P PPPPP PPP P PL
Sbjct: 472 PPPPPPPPPPPPPPPPFPPPPPPTPL 497
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 464 PPPPPPPPPPPP 475
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 465 PPPPPPPPPPPP 476
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 466 PPPPPPPPPPPP 477
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 467 PPPPPPPPPPPP 478
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 468 PPPPPPPPPPPP 479
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 469 PPPPPPPPPPPP 480
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 406 PXPPXXPPXPPPXPXXXXVP 465
P PP PP PPP P P
Sbjct: 470 PPPPPPPPPPPPPPPPPPFP 489
>SB_41910| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1486
Score = 29.1 bits (62), Expect = 5.4
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPG 476
P PP PP PPP G PG
Sbjct: 1261 PMPPQPPFMPPPPRMQPPGPPG 1282
>SB_40518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1000
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXG 461
P PPPPP PPP G
Sbjct: 983 PPPPPPPPPPPPMRKLG 999
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 982 PPPPPPPPPPPP 993
>SB_54784| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 553
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 226 PEVHDFVDHVGPCDVPQCFCDRP 294
PE+ D D GPC VP F D P
Sbjct: 10 PEIQDNPDGWGPCSVPTAFKDIP 32
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 403 TPXPPXXPPXPPPXPXXXXVP 465
+P PP PP PPP P P
Sbjct: 1310 SPPPPPPPPPPPPPPPLPPTP 1330
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 372 NKIRMSVCSTYXXPXPPPPPXXPPP 446
NK ++ + P PPPPP PPP
Sbjct: 1301 NKEQIQPPESPPPPPPPPPPPPPPP 1325
>SB_42380| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1430
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 400 LTPXPPXXPPXPPPXPXXXXVPGARGXXL 486
+TP PP PP PPP +P RG L
Sbjct: 792 ITPPPPPPPPPPPPEDLIIPLP-RRGSDL 819
>SB_12366| Best HMM Match : SRCR (HMM E-Value=4.4e-33)
Length = 457
Score = 29.1 bits (62), Expect = 5.4
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 400 LTPXPPXXPPXPPPXPXXXXVP 465
++P PP PP PPP P P
Sbjct: 363 MSPPPPPPPPPPPPSPPPPPPP 384
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP P P
Sbjct: 369 PPPPPPPPSPPPPPPPPPPSPPPPP 393
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP P P
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPAPPP 422
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 406 PXPPXXPPXPPPXPXXXXVPGA 471
P PP PP PPP P P A
Sbjct: 398 PPPPPPPPPPPPPPPPPPPPPA 419
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP P P
Sbjct: 400 PPPPPPPPPPPPPPPPPPPAPPPPP 424
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP P P
Sbjct: 401 PPPPPPPPPPPPPPPPPPAPPPPPP 425
Score = 28.7 bits (61), Expect = 7.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +1
Query: 406 PXPPXXPPXPPPXPXXXXVP 465
P PP PP PPP P P
Sbjct: 401 PPPPPPPPPPPPPPPPPPAP 420
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP + P P
Sbjct: 402 PPPPPPPPPPPPPPPPPAPPPPPPP 426
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGPGXXP 485
P PPPPP PPP P P
Sbjct: 403 PPPPPPPPPPPPPPPPAPPPPPPPP 427
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 387 PSPPPPPQPPPP 398
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +1
Query: 403 TPXPPXXPPXPPPXPXXXXVP 465
+P PP PP PPP P P
Sbjct: 388 SPPPPPQPPPPPPPPPPPPPP 408
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 418 PAPPPPPPPPPP 429
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 420 PPPPPPPPPPPP 431
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 421 PPPPPPPPPPPP 432
>SB_11023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 399 TYXXPXPPPPPXXPPPXXXXGSGGPGXXP 485
T P PPPP PPP +G P P
Sbjct: 361 TNNTPPPPPPTNKPPPPPPPTNGPPPPPP 389
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 399 TYXXPXPPPPPXXPPPXXXXGSGGPGXXP 485
T P PPPP PPP +G P P
Sbjct: 371 TNKPPPPPPPTNGPPPPPPPTNGPPPPPP 399
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +3
Query: 399 TYXXPXPPPPPXXPPPXXXXGSGGPGXXP 485
T P PPPP PPP +G P P
Sbjct: 381 TNGPPPPPPPTNGPPPPPPPTNGPPPPPP 409
>SB_5350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.1 bits (62), Expect = 5.4
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 396 STYXXPXPPPPPXXPPPXXXXGS 464
ST P PPPP PPP GS
Sbjct: 370 STPCAPFAPPPPPPPPPPPAPGS 392
Score = 29.1 bits (62), Expect = 5.4
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 393 CSTYXXPXPPPPPXXPPP 446
C+ + P PPPPP P P
Sbjct: 373 CAPFAPPPPPPPPPPPAP 390
>SB_48319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 28.7 bits (61), Expect = 7.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 366 HVNKIRMSVCSTYXXPXPPPPPXXPPP 446
HV V P PPPPP PPP
Sbjct: 446 HVEVHEKLVARQDDTPIPPPPPMSPPP 472
>SB_16095| Best HMM Match : Podocalyxin (HMM E-Value=1)
Length = 768
Score = 28.7 bits (61), Expect = 7.1
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 4/29 (13%)
Frame = +3
Query: 411 PXPPPPPXX----PPPXXXXGSGGPGXXP 485
P PPPPP PPP G G P P
Sbjct: 676 PPPPPPPLPGGAAPPPPPPIGGGAPPPPP 704
>SB_26475| Best HMM Match : Cadherin (HMM E-Value=0.009)
Length = 340
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/20 (55%), Positives = 12/20 (60%), Gaps = 2/20 (10%)
Frame = +3
Query: 393 CSTYXXPXP--PPPPXXPPP 446
C +Y P P PPPP PPP
Sbjct: 156 CRSYYSPPPQPPPPPLPPPP 175
>SB_18739| Best HMM Match : YhhN (HMM E-Value=7.3)
Length = 306
Score = 28.7 bits (61), Expect = 7.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 417 PPPPPXXPPPXXXXGSGGP 473
PPPPP PPP S GP
Sbjct: 252 PPPPPPPPPPSDYNVSVGP 270
>SB_54795| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1220
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 142 PPPPPPPPSPPP 153
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 143 PPPPPPPSPPPP 154
>SB_51714| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 542
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 363 PTPPPPPHSPPP 374
>SB_47282| Best HMM Match : RCSD (HMM E-Value=0.53)
Length = 264
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 79 PPPPPPPPPPPP 90
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 417 PPPPPXXPPPXXXXGSGGP 473
PPPPP PPP G+ P
Sbjct: 80 PPPPPPPPPPPPPPGAKKP 98
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 80 PPPPPPPPPPPP 91
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 81 PPPPPPPPPPPP 92
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 82 PPPPPPPPPPPP 93
>SB_41429| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 732
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 476 PRAPGTXXXXGXGGGXGGXXGGXG 405
PR G G GGG GG GG G
Sbjct: 364 PRTEGGGRGGGRGGGRGGFRGGRG 387
>SB_39784| Best HMM Match : WH2 (HMM E-Value=2e-05)
Length = 480
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 2 PPPPPPPGPPPP 13
>SB_31904| Best HMM Match : Extensin_2 (HMM E-Value=0.5)
Length = 398
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 310 PVPPPPPSVPPP 321
>SB_11994| Best HMM Match : ERM (HMM E-Value=0.28)
Length = 465
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 280 PPPPPPPPPPPP 291
Score = 28.3 bits (60), Expect = 9.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 417 PPPPPXXPPPXXXXGSGGP 473
PPPPP PPP G+ P
Sbjct: 281 PPPPPPPPPPPPPPGAKKP 299
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 281 PPPPPPPPPPPP 292
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 282 PPPPPPPPPPPP 293
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 283 PPPPPPPPPPPP 294
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 1157 PPPPPPPPPPPP 1168
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 1171 PSPPPPPPPPPP 1182
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 1173 PPPPPPPPPPPP 1184
>SB_38456| Best HMM Match : BTB (HMM E-Value=8.8e-26)
Length = 1410
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 361 PPPPPPPPTPPP 372
>SB_31643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 403 TPXPPXXPPXPPPXPXXXXVPG 468
TP PP PP PPP P PG
Sbjct: 100 TPPPPTMPPTPPP-PQTPAPPG 120
>SB_21376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 290
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 101 PYPPPPPYPPPP 112
>SB_16220| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 481
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 106 LFVVAAVGYVTGQHFPTRKCPKGEH 180
LF +A + ++TG H TRK P GEH
Sbjct: 354 LFAMATLYFLTGYHLWTRK-PPGEH 377
>SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2149
Score = 28.3 bits (60), Expect = 9.4
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = +3
Query: 411 PXPPPPPXXPPPXXXXGSGGP--GXXPLXRVNW 503
P PPPPP P G GP G L RVNW
Sbjct: 927 PAPPPPPGLP------GVDGPDGGRMQLKRVNW 953
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 2061 PVPPPPPSVPPP 2072
>SB_11420| Best HMM Match : MBOAT (HMM E-Value=6.9e-06)
Length = 628
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 211 PPPPPPPPPPPP 222
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 212 PPPPPPPPPPPP 223
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 213 PPPPPPPPPPPP 224
>SB_2012| Best HMM Match : Extensin_2 (HMM E-Value=0.1)
Length = 305
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 195 PPPPPPPPPPPP 206
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 196 PPPPPPPPPPPP 207
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 197 PPPPPPPPPPPP 208
Score = 28.3 bits (60), Expect = 9.4
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 411 PXPPPPPXXPPP 446
P PPPPP PPP
Sbjct: 198 PPPPPPPPPPPP 209
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,886,079
Number of Sequences: 59808
Number of extensions: 486287
Number of successful extensions: 3529
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1245
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2600
length of database: 16,821,457
effective HSP length: 82
effective length of database: 11,917,201
effective search space used: 2729039029
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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