Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M17
         (899 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esteras...    23   4.3  
AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esteras...    23   4.3  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    22   7.5  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   7.5  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.9  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.9  

>AJ850291-1|CAH64511.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 581 NFTNKAFFSLH 549
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AJ850290-1|CAH64510.1|  533|Tribolium castaneum putative esterase
           protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -1

Query: 581 NFTNKAFFSLH 549
           NF NKAFF  H
Sbjct: 20  NFNNKAFFCFH 30


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 14/42 (33%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
 Frame = -1

Query: 896 RFFXRGLSPRNFG----GKPXIXXPLXGG*XRXPPXRXXPGA 783
           R   R L P +FG    G P +  P        PP    PGA
Sbjct: 182 RLSARPLLPPSFGIFPGGAPPLVSPFLAAMAHRPPHFAFPGA 223


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 74  NVSNEKFYCIVVCC 115
           N +N K+Y + VCC
Sbjct: 49  NNTNRKYYWLNVCC 62


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +3

Query: 108 FVVAAVGYVTGQHFPT 155
           FV   +GY   QHF T
Sbjct: 421 FVAFTIGYDLNQHFET 436


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +3

Query: 213 DCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPE 332
           D  N  +   +D++   D  +   D  N+R  K    VPE
Sbjct: 122 DASNGNLKFSIDNILKADFGRRITDPINIRKCKPKTVVPE 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,155
Number of Sequences: 336
Number of extensions: 3655
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25030786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)