Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M17
         (899 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7 |Schizos...    31   0.22 
SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomy...    27   4.8  
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom...    26   6.3  
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc...    26   6.3  
SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter |Schizo...    26   8.4  

>SPAC13G7.01c |erg7|SPAC4G9.21c|lanosterol synthase Erg7
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 721

 Score = 31.1 bits (67), Expect = 0.22
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = -2

Query: 739 SKTPFPGGWAXSLMQXKTSHTS 674
           S+TPFP GWA  ++Q   +HT+
Sbjct: 112 SQTPFPKGWAPEIIQYLINHTN 133


>SPBC1683.01 |||inorganic phosphate transporter |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 573

 Score = 26.6 bits (56), Expect = 4.8
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 755 EXGPKKQNAFPGGLGGFINAGKNFPHL 675
           E GP  +  +P G+ G +NA  N  ++
Sbjct: 81  EKGPNGKGHYPSGIRGLVNAASNIGNI 107


>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
           Eng2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 706

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
 Frame = -2

Query: 277 HCGTSHGPTWS---TKSWTSGFSQSGSAI 200
           + GT H P+WS   + +W +G S  G AI
Sbjct: 45  YIGTRHNPSWSHPYSVTWLNGSSYYGLAI 73


>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 164

 Score = 26.2 bits (55), Expect = 6.3
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = -3

Query: 180 NVHLSGIFSLENVAR*RNRQLPQ 112
           N+H+SGI +LENV   +  QL Q
Sbjct: 103 NLHMSGIENLENVLLEQKEQLQQ 125


>SPBC8E4.01c ||SPBP4G3.01|inorganic phosphate transporter
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 572

 Score = 25.8 bits (54), Expect = 8.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -1

Query: 755 EXGPKKQNAFPGGLGGFINAGKNFPHL 675
           E GP  +  +P G+ G +NA  N  ++
Sbjct: 81  EKGPTGKGHYPSGIRGLVNASANIGNI 107


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,170,079
Number of Sequences: 5004
Number of extensions: 57305
Number of successful extensions: 130
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 130
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)