Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M13
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    25   0.68 
AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein pr...    24   1.2  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    24   1.2  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.6  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   8.4  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 25.0 bits (52), Expect = 0.68
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +3

Query: 9   SLPTHYREFLRFKPFRLPVALYAFSRNSNKRNDVGRIRRAR 131
           +L  HYR     +PF+  +   AF+   N +  +G + RA+
Sbjct: 149 ALQMHYRTHTGERPFKCKICGRAFTTKGNLKTHMG-VHRAK 188


>AY490815-1|AAR82970.1|  136|Tribolium castaneum glass protein
           protein.
          Length = 136

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 9   SLPTHYREFLRFKPFRLPVALYAFSRNSN 95
           +L  H R     KPFR PV    FS++S+
Sbjct: 36  NLTAHVRTHSGEKPFRCPVCDRRFSQSSS 64


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 9   SLPTHYREFLRFKPFRLPVALYAFSRNSN 95
           +L  H R     KPFR PV    FS++S+
Sbjct: 292 NLTAHVRTHSGEKPFRCPVCDRRFSQSSS 320


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/49 (30%), Positives = 15/49 (30%)
 Frame = +3

Query: 438 PXGFPGKPXXFFXXXGGXRXKXPPPPXXGXXLXXPPPXXXGLXGXXXPP 584
           P G PG    FF    G     PPP   G           G  G   PP
Sbjct: 116 PTGHPGAALPFF-CHNGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPP 163


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 15/49 (30%), Positives = 15/49 (30%)
 Frame = +3

Query: 438 PXGFPGKPXXFFXXXGGXRXKXPPPPXXGXXLXXPPPXXXGLXGXXXPP 584
           P G PG    FF    G     PPP   G           G  G   PP
Sbjct: 8   PTGHPGAALPFF-CHNGDPLSQPPPAHMGIPPYQLDSKTAGSMGLTRPP 55


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/25 (40%), Positives = 10/25 (40%)
 Frame = -1

Query: 620  GGXPPPPPXFXGGGXXGXXQPPPXG 546
            G   PPP    G G  G   PP  G
Sbjct: 1108 GTAVPPPSGSSGPGSTGSKSPPVAG 1132


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 9/24 (37%), Positives = 9/24 (37%)
 Frame = -2

Query: 673 PPPPXPPXXGGXXXXVXGGGXXPP 602
           PPPP PP        V      PP
Sbjct: 731 PPPPPPPRVESFAETVRTVSKIPP 754


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,477
Number of Sequences: 336
Number of extensions: 3685
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)