Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M12
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0515 - 3864796-3865425                                           31   1.2  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    30   2.8  
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    30   2.8  
02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042     29   5.0  
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    28   8.7  
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090...    28   8.7  
02_01_0163 + 1135592-1135623,1135718-1135816,1135904-1135960,113...    28   8.7  

>03_01_0515 - 3864796-3865425
          Length = 209

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +3

Query: 747 PPXNXXXXLXFSPTPPPXXTPXXPPXXFXPPXP 845
           PP      +  SP PPP   P  PP    PP P
Sbjct: 71  PPPPPPPSVTSSPPPPPLPPPPPPPAASPPPPP 103



 Score = 29.5 bits (63), Expect = 3.8
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 747 PPXNXXXXLXFSPTPPPXXTPXXPPXXFXPPXP 845
           PP      L   P PPP  T   PP    PP P
Sbjct: 61  PPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPP 93


>08_01_0375 -
           3307206-3307316,3307870-3307965,3308061-3308132,
           3308247-3308315,3308427-3308513,3308753-3308858,
           3309118-3309237,3309327-3309406,3309497-3309878,
           3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 12/34 (35%), Positives = 13/34 (38%)
 Frame = +3

Query: 744 GPPXNXXXXLXFSPTPPPXXTPXXPPXXFXPPXP 845
           GPP        F P PP    P  PP  +  P P
Sbjct: 61  GPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPP 94


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = +3

Query: 780  SPTPPPXXTPXXPPXXFXPPXPXG 851
            +P PPP  +P  PP    PP P G
Sbjct: 1168 TPPPPPPLSPSLPPPPPPPPLPSG 1191


>02_04_0140 - 20156655-20156834,20157139-20159345,20159970-20160042
          Length = 819

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 13/24 (54%), Positives = 13/24 (54%)
 Frame = +3

Query: 780 SPTPPPXXTPXXPPXXFXPPXPXG 851
           SP PPP  TP  PP    PP P G
Sbjct: 5   SPEPPPNPTPVPPP---PPPAPSG 25


>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/33 (39%), Positives = 13/33 (39%)
 Frame = +3

Query: 747 PPXNXXXXLXFSPTPPPXXTPXXPPXXFXPPXP 845
           PP      L  SP PPP   P  P     PP P
Sbjct: 590 PPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPP 622


>09_06_0107 +
           20907560-20908491,20908511-20908625,20908967-20909058,
           20909293-20909556,20910714-20911494
          Length = 727

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 13/33 (39%), Positives = 14/33 (42%)
 Frame = +3

Query: 780 SPTPPPXXTPXXPPXXFXPPXPXGXXXNFXPXT 878
           S  PPP  TP  PP    PP P     +  P T
Sbjct: 70  SAAPPPPQTPPSPPPPPPPPPPPPPPLSPTPTT 102


>02_01_0163 +
           1135592-1135623,1135718-1135816,1135904-1135960,
           1136053-1136116,1136174-1136392,1138562-1138945
          Length = 284

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 780 SPTPPPXXTPXXPPXXFXPPXP 845
           +P PPP  +P  PP    PP P
Sbjct: 174 NPAPPPVPSPSAPPLPPQPPPP 195


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,815,347
Number of Sequences: 37544
Number of extensions: 364704
Number of successful extensions: 1617
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 989
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1487
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)