Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M12
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domai...    25   4.1  
DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domai...    24   5.4  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    24   7.1  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   7.1  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.4  

>DQ370039-1|ABD18600.1|  168|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 168

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 129 CACVNAAKTTYKICVPSQHLKAC 197
           CAC  A    Y +C P++  + C
Sbjct: 22  CACPYAHPYPYDVCGPNEEFQTC 44


>DQ370043-1|ABD18604.1|  161|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 161

 Score = 24.2 bits (50), Expect = 5.4
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +3

Query: 129 CACVNAAKTTYKICVPSQHLKAC 197
           CAC  A    Y +C P++ L  C
Sbjct: 22  CACPYAHPYPYDLCGPNEELLEC 44


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 129 CACVNAAKTTYKICVPSQHLKAC 197
           CAC  A    Y +C P++  + C
Sbjct: 22  CACPYAHPYPYDLCGPNEEFQEC 44


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 23.8 bits (49), Expect = 7.1
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -1

Query: 844 GXGGXNXXGGKXGVXXGGGVG 782
           G GG    GG+ G   GGG G
Sbjct: 723 GDGGCGSIGGEVGSVGGGGGG 743


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 9.4
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +1

Query: 82  CLDNGSKIFHFDNPAFVHV*TQRKLHIK 165
           C D+  KI H DNP      TQ  + +K
Sbjct: 702 CTDDAGKIKHNDNPFIEPAQTQTVVDMK 729


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 681,017
Number of Sequences: 2352
Number of extensions: 11364
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)