Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M11
         (924 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...    86   7e-17
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...    86   7e-17
BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p pro...    32   1.3  
AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA...    32   1.3  

>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score = 85.8 bits (203), Expect = 7e-17
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 87  RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 209
           RKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL
Sbjct: 139 RKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNL 179


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score = 85.8 bits (203), Expect = 7e-17
 Identities = 39/41 (95%), Positives = 40/41 (97%)
 Frame = +3

Query: 87  RKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNL 209
           RKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL
Sbjct: 139 RKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNL 179


>BT003208-1|AAO24963.1|  478|Drosophila melanogaster SD23764p
           protein.
          Length = 478

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +3

Query: 681 PXPYPXXGXVSQXPGXGPXPPPXGGXVXXKXPP 779
           P P P  G V   P   P PPP GG +    PP
Sbjct: 224 PTPPPPAGGVLVMPRPPPPPPPAGGVLVMPPPP 256



 Score = 30.7 bits (66), Expect = 2.9
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +3

Query: 681 PXPYPXXGXVSQXPGXGPXPPPXGGXVXXKXPPF*PRTG 797
           P P P  G V   P   P PP  G  V  + PP  P  G
Sbjct: 209 PDPMPPVGGVMVMPSPTPPPPAGGVLVMPRPPPPPPPAG 247


>AE013599-1621|AAF58436.2|  478|Drosophila melanogaster CG3884-PA,
           isoform A protein.
          Length = 478

 Score = 31.9 bits (69), Expect = 1.3
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +3

Query: 681 PXPYPXXGXVSQXPGXGPXPPPXGGXVXXKXPP 779
           P P P  G V   P   P PPP GG +    PP
Sbjct: 224 PTPPPPAGGVLVMPRPPPPPPPAGGVLVMPPPP 256



 Score = 30.7 bits (66), Expect = 2.9
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +3

Query: 681 PXPYPXXGXVSQXPGXGPXPPPXGGXVXXKXPPF*PRTG 797
           P P P  G V   P   P PP  G  V  + PP  P  G
Sbjct: 209 PDPMPPVGGVMVMPSPTPPPPAGGVLVMPRPPPPPPPAG 247


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,825,441
Number of Sequences: 53049
Number of extensions: 569299
Number of successful extensions: 1508
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1409
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4546383066
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)