Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_M10
(862 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g27670.1 68417.m03979 25.3 kDa small heat shock protein, chlo... 32 0.56
At1g35515.1 68414.m04409 myb family transcription factor (MYB8) ... 31 1.3
At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) simi... 29 4.0
At2g22430.1 68415.m02660 homeobox-leucine zipper protein 6 (HB-6... 29 5.3
At5g20260.1 68418.m02412 exostosin family protein contains Pfam ... 28 9.2
At1g79940.1 68414.m09342 DNAJ heat shock N-terminal domain-conta... 28 9.2
At1g59750.2 68414.m06728 auxin-responsive factor (ARF1) identica... 28 9.2
At1g59750.1 68414.m06727 auxin-responsive factor (ARF1) identica... 28 9.2
>At4g27670.1 68417.m03979 25.3 kDa small heat shock protein,
chloroplast precursor (HSP25.3-P) identical to small
heat shock protein, chloroplast precursor SP:P31170 from
[Arabidopsis thaliana]; identified in Scharf, K-D., et
al,Cell Stress & Chaperones (2001) 6: 225-237.
Length = 227
Score = 31.9 bits (69), Expect = 0.56
Identities = 21/77 (27%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +1
Query: 454 LKLRFDVSQYTPEEIVVKTVDNKLLV--HAKHEEKSDTKS--VYREYNREFLLXKGTNPE 621
+K+RFD+ + E++ + DN L++ K E+ D+ S Y L +
Sbjct: 138 IKMRFDMPGLSKEDVKISVEDNVLVIKGEQKKEDSDDSWSGRSVSSYGTRLQLPDNCEKD 197
Query: 622 XIKSSLSRDGVLTVEAP 672
IK+ L ++GVL + P
Sbjct: 198 KIKAEL-KNGVLFITIP 213
>At1g35515.1 68414.m04409 myb family transcription factor (MYB8)
similar to DNA-binding protein GB:AAA98761 GI:1020155
from [Arabidopsis thaliana]
Length = 212
Score = 30.7 bits (66), Expect = 1.3
Identities = 20/65 (30%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 521 NYWSTPNTRRNLIRNLCTENTTGSFCXPREQILRX----LSLRCPGTVCLPWKRHCHNSP 688
NYW+T + +R L+ T GS P+ L PG+V L + C N
Sbjct: 106 NYWNT-HIKRKLLNRGIDPKTHGSIIEPKTTSFHPRNEDLKSTFPGSVKLKMETSCENCA 164
Query: 689 SRTGT 703
S +GT
Sbjct: 165 STSGT 169
>At1g55970.1 68414.m06419 histone acetyltransferase 4 (HAC4) similar
to CREB-binding protein GB:AAC51770 GI:2443859 from
[Homo sapiens]; contains Pfam PF02135: TAZ zinc finger
profile; contains Pfam PF00569: Zinc finger, ZZ type
domain; identical to histone acetyltransferase HAC4
(GI:14794966) {Arabidopsis thaliana}
Length = 1456
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +2
Query: 440 VTARLSSFALMSASILPKRSLLR-LSTTNYWSTPNTRRNL 556
VT+ S+ M + LPKR L L TN+ S PN R NL
Sbjct: 315 VTSYHSNLQPMQQTPLPKRQLHHPLWNTNFQSAPNNRDNL 354
>At2g22430.1 68415.m02660 homeobox-leucine zipper protein 6 (HB-6) /
HD-ZIP transcription factor 6 identical to
homeobox-leucine zipper protein ATHB-6 (HD-ZIP protein
ATHB-6) (SP:P46668) [Arabidopsis thaliana]
Length = 311
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/37 (35%), Positives = 24/37 (64%), Gaps = 3/37 (8%)
Frame = +1
Query: 205 DFSVIDTEFSSIRERFDAEMRKME---EEMSKFRSEL 306
D+ V+ T++ S+R FD+ R E +E+SK +++L
Sbjct: 122 DYGVLKTQYDSLRHNFDSLRRDNESLLQEISKLKTKL 158
>At5g20260.1 68418.m02412 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 334
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 530 STPNTRRNLIRNLCTENTTGSFCXPRE 610
S P +NLIR LC NT+ F R+
Sbjct: 121 SNPELMKNLIRVLCNANTSEGFMPQRD 147
>At1g79940.1 68414.m09342 DNAJ heat shock N-terminal
domain-containing protein / sec63 domain-containing
protein similar to SP|Q9UGP8 Translocation protein SEC63
homolog {Homo sapiens}; contains Pfam profiles PF00226
DnaJ domain, PF02889 Sec63 domain
Length = 702
Score = 27.9 bits (59), Expect = 9.2
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +1
Query: 187 IPIKLGDFSVIDTEFSSIRERFDAEMRKMEEEMSKF 294
IP++ D + F S+R + +++ M++E +KF
Sbjct: 258 IPVRRTDDEPLQKLFMSVRSELNLDLKNMKQEQAKF 293
>At1g59750.2 68414.m06728 auxin-responsive factor (ARF1) identical
to auxin response factor 1 GI:2245378 from [Arabidopsis
thaliana]
Length = 662
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 481 YTPEEIVVKTVDNKLLVHAKHEEKSDTK 564
YTPEE+ + NKL V+A+ + K+D +
Sbjct: 619 YTPEEVKKLSPKNKLAVNARMQLKADAE 646
>At1g59750.1 68414.m06727 auxin-responsive factor (ARF1) identical
to auxin response factor 1 GI:2245378 from [Arabidopsis
thaliana]
Length = 665
Score = 27.9 bits (59), Expect = 9.2
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 481 YTPEEIVVKTVDNKLLVHAKHEEKSDTK 564
YTPEE+ + NKL V+A+ + K+D +
Sbjct: 622 YTPEEVKKLSPKNKLAVNARMQLKADAE 649
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,014,149
Number of Sequences: 28952
Number of extensions: 312275
Number of successful extensions: 995
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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