Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M07
         (843 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204; Euka...    50   7e-05
UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4; Bilateria|...    46   0.002
UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3; Eukary...    43   0.008
UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2; Ost...    39   0.18 
UniRef50_Q7SCZ7 Cluster: Predicted protein; n=5; Pezizomycotina|...    38   0.24 
UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S riboso...    34   3.9  
UniRef50_Q7PNI8 Cluster: ENSANGP00000013088; n=1; Anopheles gamb...    34   5.1  

>UniRef50_P46776 Cluster: 60S ribosomal protein L27a; n=204;
           Eukaryota|Rep: 60S ribosomal protein L27a - Homo sapiens
           (Human)
          Length = 148

 Score = 50.0 bits (114), Expect = 7e-05
 Identities = 30/84 (35%), Positives = 36/84 (42%)
 Frame = +2

Query: 290 NCNXCPXXNLYXRXXLFXEXTMLKVXLXSXLXRXPLXXIVXXGYYKXLGXXNXPXHPVXX 469
           N + CP  NL     L  E T +     +     P+  +V  GYYK LG    P  PV  
Sbjct: 66  NQSFCPTVNLDKLWTLVSEQTRVNAA-KNKTGAAPIIDVVRSGYYKVLGKGKLPKQPVIV 124

Query: 470 XXXXXSXSAEXXMXDVGGACVLSA 541
                S  AE  +  VGGACVL A
Sbjct: 125 KAKFFSRRAEEKIKSVGGACVLVA 148


>UniRef50_A1BQ56 Cluster: Ribosomal protein L27a; n=4;
           Bilateria|Rep: Ribosomal protein L27a - Ascaris suum
           (Pig roundworm) (Ascaris lumbricoides)
          Length = 133

 Score = 45.6 bits (103), Expect = 0.002
 Identities = 27/80 (33%), Positives = 35/80 (43%)
 Frame = +2

Query: 302 CPXXNLYXRXXLFXEXTMLKVXLXSXLXRXPLXXIVXXGYYKXLGXXNXPXHPVXXXXXX 481
           CP  NL     L  E T  +        + P+  +V  GY+K LG    P  PV      
Sbjct: 56  CPTVNLDKLWSLVSEKT--RTTYAEKKDKAPVIDVVKAGYFKVLGKGLLPKQPVIVKAKF 113

Query: 482 XSXSAEXXMXDVGGACVLSA 541
            S +AE  +  VGGAC+L A
Sbjct: 114 FSRTAEQKIKGVGGACILVA 133


>UniRef50_Q00454 Cluster: 60S ribosomal protein L27a; n=3;
           Eukaryota|Rep: 60S ribosomal protein L27a - Tetrahymena
           thermophila
          Length = 149

 Score = 43.2 bits (97), Expect = 0.008
 Identities = 25/80 (31%), Positives = 35/80 (43%)
 Frame = +2

Query: 302 CPXXNLYXRXXLFXEXTMLKVXLXSXLXRXPLXXIVXXGYYKXLGXXNXPXHPVXXXXXX 481
           CP  N+     L  + T  K        + P+  +   G++K LG    P  PV      
Sbjct: 72  CPVVNIDKLWSLVSDATRQKYA--EDKKKVPVIDVTKAGFFKVLGKGRLPNQPVVVKAKY 129

Query: 482 XSXSAEXXMXDVGGACVLSA 541
            S +AE  +  VGGACVL+A
Sbjct: 130 FSKTAERRIVAVGGACVLTA 149


>UniRef50_Q00V89 Cluster: 60s ribosomal protein L15/L27; n=2;
           Ostreococcus|Rep: 60s ribosomal protein L15/L27 -
           Ostreococcus tauri
          Length = 198

 Score = 38.7 bits (86), Expect = 0.18
 Identities = 18/50 (36%), Positives = 25/50 (50%)
 Frame = +2

Query: 392 PLXXIVXXGYYKXLGXXNXPXHPVXXXXXXXSXSAEXXMXDVGGACVLSA 541
           P+  +   G +K LG    P  PV       S  AE  + +VGGAC+L+A
Sbjct: 149 PVIDLTDHGIFKLLGKGQLPNQPVVVKCRYISKLAEKKIKEVGGACILTA 198


>UniRef50_Q7SCZ7 Cluster: Predicted protein; n=5;
           Pezizomycotina|Rep: Predicted protein - Neurospora
           crassa
          Length = 452

 Score = 38.3 bits (85), Expect = 0.24
 Identities = 19/66 (28%), Positives = 23/66 (34%)
 Frame = +1

Query: 631 PFPPXGXXPPXDXGXXAPXXIXXTXCTXAIPPXPXXDXPXPVXNLSQXXAXCXPPPXXXA 810
           P PP G  PP   G   P     +    + PP P    P P  + +       PPP   A
Sbjct: 213 PPPPVGKKPPPPPGSRKPSAAIHSSAPPSAPPPPPSFAPPPPSSAAPSLPPAPPPPPPTA 272

Query: 811 XXXPXP 828
              P P
Sbjct: 273 APRPPP 278


>UniRef50_UPI0000DA3FAD Cluster: PREDICTED: similar to 60S ribosomal
           protein L27a; n=1; Rattus norvegicus|Rep: PREDICTED:
           similar to 60S ribosomal protein L27a - Rattus
           norvegicus
          Length = 86

 Score = 34.3 bits (75), Expect = 3.9
 Identities = 18/41 (43%), Positives = 19/41 (46%)
 Frame = +2

Query: 419 YYKXLGXXNXPXHPVXXXXXXXSXSAEXXMXDVGGACVLSA 541
           YYK  G    P  PV       S  AE  +  VGGACVL A
Sbjct: 46  YYKVPGKRKLPKQPVMVKAEGSSRRAEEKIEGVGGACVLVA 86


>UniRef50_Q7PNI8 Cluster: ENSANGP00000013088; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000013088 - Anopheles gambiae
           str. PEST
          Length = 157

 Score = 33.9 bits (74), Expect = 5.1
 Identities = 19/66 (28%), Positives = 20/66 (30%)
 Frame = +1

Query: 631 PFPPXGXXPPXDXGXXAPXXIXXTXCTXAIPPXPXXDXPXPVXNLSQXXAXCXPPPXXXA 810
           P P  G  PP   G   P            PP P    P PV       +   PPP   A
Sbjct: 74  PAPVYGPPPPQSYGPPPPQSYGPPPPVHHAPPPPPPPPPRPVYGPPPQQSYGPPPPVHHA 133

Query: 811 XXXPXP 828
              P P
Sbjct: 134 PPPPPP 139


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 416,352,526
Number of Sequences: 1657284
Number of extensions: 5469824
Number of successful extensions: 10844
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10514
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 73783549980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)