Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M07
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1250 - 25183375-25183815                                         35   0.071
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336...    32   0.66 
11_06_0610 - 25449085-25453284                                         29   6.1  

>07_03_1250 - 25183375-25183815
          Length = 146

 Score = 35.1 bits (77), Expect = 0.071
 Identities = 18/52 (34%), Positives = 24/52 (46%)
 Frame = +2

Query: 386 RXPLXXIVXXGYYKXLGXXNXPXHPVXXXXXXXSXSAEXXMXDVGGACVLSA 541
           + PL  +   GY+K LG    P  P+       S  AE  +   GGA VL+A
Sbjct: 95  KAPLLDVTQFGYFKVLGKGLLPEKPIVVKAKLISKVAEKKIKAAGGAVVLTA 146


>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
            33643-34147,34250-34358,34436-34548,34619-34806,
            35481-36129,36169-36691,36760-36911,37042-37141,
            37301-37416
          Length = 1530

 Score = 31.9 bits (69), Expect = 0.66
 Identities = 18/66 (27%), Positives = 20/66 (30%)
 Frame = +1

Query: 631  PFPPXGXXPPXDXGXXAPXXIXXTXCTXAIPPXPXXDXPXPVXNLSQXXAXCXPPPXXXA 810
            P P     PP       P       C   +PP P    P P   LS       PPP   +
Sbjct: 1131 PLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPS 1190

Query: 811  XXXPXP 828
               P P
Sbjct: 1191 GPPPQP 1196


>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 19/66 (28%), Positives = 22/66 (33%)
 Frame = +1

Query: 631  PFPPXGXXPPXDXGXXAPXXIXXTXCTXAIPPXPXXDXPXPVXNLSQXXAXCXPPPXXXA 810
            P PP    PP      AP  +         PP P    P PV +L        PPP   +
Sbjct: 1241 PPPPEKSPPPA-----APVILSPPAVKSLPPPAPVSLPPPPVKSLPPPAPVSLPPPVVKS 1295

Query: 811  XXXPXP 828
               P P
Sbjct: 1296 LPPPAP 1301


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,711,035
Number of Sequences: 37544
Number of extensions: 202953
Number of successful extensions: 573
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 548
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)