Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M06
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical ...    32   0.60 
Z83237-3|CAB05787.1|  460|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    29   3.2  
Z81147-4|CAB03529.1|  578|Caenorhabditis elegans Hypothetical pr...    29   4.2  

>AF125964-1|AAD14753.1|  471|Caenorhabditis elegans Hypothetical
           protein W03G1.5 protein.
          Length = 471

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +2

Query: 707 GXSPFPPHFMXNHXLPXYXPAXGPPXPXLXPN 802
           G  PFPPH   +H  P + P   PP P   P+
Sbjct: 422 GCRPFPPHH-GHHHFPPFWPPCPPPPPFWPPH 452


>Z83237-3|CAB05787.1|  460|Caenorhabditis elegans Hypothetical
           protein R06B9.3 protein.
          Length = 460

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 686 TEEXTTEGXSPFPPHFMXNHXLPXYXPAXGPP 781
           TE  T E   PF P +   + LP Y P   PP
Sbjct: 428 TELNTDENEQPFAPKYPVFNNLPVYNPTAPPP 459


>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +2

Query: 686 TEEXTTEGXSPFPPHFMXNHXLPXYXPAXGPP 781
           TE  T E   PF P +   + LP Y P   PP
Sbjct: 439 TELNTDENAQPFAPKYPVFNDLPVYNPTAPPP 470


>Z81147-4|CAB03529.1|  578|Caenorhabditis elegans Hypothetical
           protein T09E11.5 protein.
          Length = 578

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +1

Query: 31  NPLRFFLLLPKIFECFYKTACYARV 105
           N L++F L+P IF  F+K A +A V
Sbjct: 231 NTLKYFFLVPMIFLAFFKYAIHATV 255


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,871,092
Number of Sequences: 27780
Number of extensions: 318217
Number of successful extensions: 731
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 708
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)