Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_M05
(860 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1074 + 30168065-30168577 35 0.096
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 33 0.22
10_07_0039 - 12269928-12270103,12270871-12271015,12271066-122710... 33 0.29
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 33 0.39
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 31 1.2
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 30 2.1
01_06_0789 - 32010131-32010330,32010438-32010866,32011658-320117... 30 2.1
04_04_0368 + 24741755-24741970,24742415-24742811,24742892-247431... 30 2.7
06_03_1310 + 29238644-29240260 29 3.6
06_01_0475 + 3375757-3375800,3375898-3376168,3376252-3376440,337... 29 3.6
09_03_0040 + 11816056-11819069,11819837-11820428 29 4.8
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 29 4.8
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335 29 4.8
02_02_0403 - 9866122-9867231 29 4.8
06_03_0435 - 20742551-20743351 29 6.3
03_01_0381 - 2960533-2960805 29 6.3
02_01_0384 - 2781362-2782299,2782320-2782428 29 6.3
01_06_0681 - 31150651-31151148,31151427-31151483 29 6.3
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 29 6.3
04_04_0265 + 24040689-24041051,24041210-24041457,24041845-240423... 28 8.3
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000... 28 8.3
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 28 8.3
>03_05_1074 + 30168065-30168577
Length = 170
Score = 34.7 bits (76), Expect = 0.096
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -2
Query: 535 LHAAAQQRPQRLQHRAARLVRVEVADECDSDGPRVVP--VGVRADVQPAGALVHLAVTSH 362
L AA ++RP + + AA VR A D DGP V P AD + AG + T
Sbjct: 95 LPAAMRRRPLQAEEMAALAVRASAALVGDHDGPLVFPEAAASAADPRAAGKGCRRSRTRR 154
Query: 361 QERGSD-VPVL 332
RG D VP L
Sbjct: 155 HSRGRDFVPDL 165
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 33.5 bits (73), Expect = 0.22
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 320 CGWSGYSAPAPRSQRPSCR 264
CG+ GYS PAP++ RPSCR
Sbjct: 63 CGY-GYSTPAPKAPRPSCR 80
>10_07_0039 -
12269928-12270103,12270871-12271015,12271066-12271094,
12271394-12271478
Length = 144
Score = 33.1 bits (72), Expect = 0.29
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 193 DPGARVVPGAAREPRHRPAHSHTL 264
D G R VPG + PRHRP H T+
Sbjct: 81 DGGRRAVPGQSTVPRHRPRHDPTI 104
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 32.7 bits (71), Expect = 0.39
Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 7/126 (5%)
Frame = +2
Query: 278 AGCEELVRNIQTNHMEALQYWDIGPSFL---VGGNGKVYEGSGWLHVGAHTYGYNSRSIG 448
AG + ++ + E++ + G SF+ +GG G+++ G W + Y S S
Sbjct: 365 AGVRTITGSVTAHARESVDD-NTGYSFVNCSIGGTGRIWLGRAWRPYSTVVFAYTSMSDI 423
Query: 449 VAFIGNFNTDEPS----GAMLEALRSLLRCGVERGHLAGDYRVVAHRQLIASESPXGKLY 616
+A G + ++PS + L ++ S++ C +R G+YR ++ P +
Sbjct: 424 IASEGWNDWNDPSRDQYASSLYSV-SIVTCMTKRTVFYGEYRCTGDGANLSDRVPYAQKL 482
Query: 617 NQIRTL 634
+ ++ L
Sbjct: 483 SDVQVL 488
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = -3
Query: 555 SPARWPRSTPQRSSDRSASSIAPLGSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTL 376
SP+ P S+ + S + S +P S + N +P P +P+ SQP PSY+
Sbjct: 1743 SPSYNP-SSAKYSPSHAYSPSSPRLSPYSQTSPNYSPTSPTYSP--TSPSYSQPSPSYSP 1799
Query: 375 PLPPTRNEGPMSQYCKAS 322
P T + GP Y S
Sbjct: 1800 TSPYTTSGGPSPDYSPTS 1817
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = -3
Query: 297 TSSSQPASVLQKGVTVCWTMTRLTGRARYDTCTGIKPSHCFLLTTSQSAAISVRSELRAS 118
TS+S A++ + T RL + + +PS ++ +S S RS LRAS
Sbjct: 35 TSASASAAMQMQAATTTTAARRLAPKPQ-PQANRCRPSSVSVVAAGRSRRRSARSSLRAS 93
Query: 117 ASTTAEWRRAMSRSGACQHVSTR 49
AS E + S + +TR
Sbjct: 94 ASLDQEVKERASPAAGKSGQATR 116
>01_06_0789 -
32010131-32010330,32010438-32010866,32011658-32011752,
32011836-32011933,32012586-32012942,32013615-32013792,
32013856-32013936,32014441-32014548,32014916-32015178
Length = 602
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -2
Query: 439 PRVVPVGVRADVQPAGALVHLAVTSHQE-RGSDVPVLQGLHVVGLDIPHQLLAASV 275
PR VPVG QP HL V Q+ +PV++ HVV + +P +A +V
Sbjct: 14 PRAVPVGFP---QPQQLRAHLPVGVPQQLHPRGLPVMRSHHVVHVPLPRPAVAVAV 66
>04_04_0368 +
24741755-24741970,24742415-24742811,24742892-24743187,
24743860-24744096
Length = 381
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = +1
Query: 196 PGARVVPGAAREPRHRPAHSHTL-----LQDGRWLRGAGAEYPDQPHGGLAILGHRTLVP 360
P + P A P HR HSH + G G P++ HG LA++ L+P
Sbjct: 178 PEGNLPPSDATLPMHRSMHSHAFNYTSGMASSSGGSGGGGFPPERKHGLLAMMAWGVLMP 237
>06_03_1310 + 29238644-29240260
Length = 538
Score = 29.5 bits (63), Expect = 3.6
Identities = 30/108 (27%), Positives = 40/108 (37%), Gaps = 2/108 (1%)
Frame = -3
Query: 657 PRSPATQASVRIWL*SFPXGLSEAMSCRCATTR*SPARWPRSTPQRS--SDRSASSIAPL 484
P PA A R W P ++ +CA P ++ Q + + R PL
Sbjct: 321 PGCPAATADGR-WN-CIPGAPAQRPPAQCAAAAAHPFDCSKAQCQATPPTTRRPGGRTPL 378
Query: 483 GSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLPPTRNEGPMS 340
LP + P P P S P PS+ P PPT +E P S
Sbjct: 379 APHRSPLPHHMPPRRTPPTP----PPPSSPTPSHLPPPPPTYSESPKS 422
>06_01_0475 +
3375757-3375800,3375898-3376168,3376252-3376440,
3376816-3376989,3378039-3378218,3378565-3378719,
3379509-3379599,3380023-3380186,3380791-3380845,
3380944-3381066,3381160-3381255,3381706-3381833,
3382407-3382466,3382607-3382896,3383127-3383237,
3383318-3383395,3383487-3383659,3384192-3384296,
3385017-3385112
Length = 860
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -2
Query: 601 RALRGNELSVRHDAVVPREVAALHAAAQQRPQRLQHR 491
RA+R + + AVV RE AA+ AA + Q +HR
Sbjct: 19 RAIRACKTAAEERAVVRRECAAIRAAISEGDQDYRHR 55
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 29.1 bits (62), Expect = 4.8
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -3
Query: 522 RSSDRSASSIAPLGSSVLKLPMNATPMDL 436
R R+AS++A G+S+ +LP+ ATP+ +
Sbjct: 301 RDCGRAASTLAESGASMEELPLEATPISV 329
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 29.1 bits (62), Expect = 4.8
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = +3
Query: 288 RSWCGISRPTTWRPCNTGTSD-----PRSWWEVTARCTRAPAGCTSARTPTGTTRGPSES 452
R W SR + R C+ + P WW AR RAP A PS S
Sbjct: 20 RPWTAASRGVSARRCSVAPAQVRARGPTEWWPAAARRRRAPRRHAVAAKAGAADARPSSS 79
>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
Length = 377
Score = 29.1 bits (62), Expect = 4.8
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 223 PRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 113
P+ VR V R +TVP+ +TD A G EK E E E
Sbjct: 120 PKFVR-VLRPKTVPIRYTDTFASGTVALEKELEKEFE 155
>02_02_0403 - 9866122-9867231
Length = 369
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 79 PRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGR-FDPGARVVPGAAREPRHRPAHS 255
P+H PL R+ S + R RRRQ +AM R F G +V G R A +
Sbjct: 297 PQHPVVPLSDDDRSDSPELPPESVPRRRRRQWRAMPRDFSHGRALVHGGHNNQRRGGAGA 356
Query: 256 -HTLLQDGRWLR 288
H+ RW R
Sbjct: 357 VHSPSSRYRWSR 368
>06_03_0435 - 20742551-20743351
Length = 266
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 494 MLEALRSLLRCGVERGHLAGDYRVVAHRQLIASESPXGKLYN 619
++ A+ +LR G+ + LA D ++ HR IA GK+ N
Sbjct: 8 VVRAVLFMLRKGMSKRKLAMDLHLLLHRGKIAGNKALGKIMN 49
>03_01_0381 - 2960533-2960805
Length = 90
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -2
Query: 214 VRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 113
+R R +TVP+ +TD A G EK E E E
Sbjct: 1 MRRSQRPKTVPIRYTDTFASGTIALEKELEKEFE 34
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.7 bits (61), Expect = 6.3
Identities = 22/75 (29%), Positives = 30/75 (40%)
Frame = +1
Query: 37 DLACPRADVLARAAPRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDPGARVVP 216
DL R + P PLG CT A LA+ +S+ + A G G+ +P
Sbjct: 129 DLRPGRREDAPGRRPSSTSAPLGPCTLAHEGLAAVLATSKAASKSEAASG----GSSAIP 184
Query: 217 GAAREPRHRPAHSHT 261
A PR P + T
Sbjct: 185 PPATAPRFPPPRAMT 199
>01_06_0681 - 31150651-31151148,31151427-31151483
Length = 184
Score = 28.7 bits (61), Expect = 6.3
Identities = 19/75 (25%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Frame = -2
Query: 673 AFLMESTFSSHSGQRSYLVVELPXRALRGNELSVRHDAVVPREV-AALHAAAQQRPQRLQ 497
AF+ ++ +G ++ + + G+ + DA++P + AA AAA+Q+ Q+ +
Sbjct: 2 AFMSSASEEESAGLKAPTDARVIRQRYEGDGPILSDDALLPADPGAAAGAAAEQQQQQDE 61
Query: 496 HRAARLVRVEVADEC 452
R+ R VA++C
Sbjct: 62 ARSVRCECCGVAEDC 76
>01_03_0303 +
14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -3
Query: 348 PMSQYCKASMWLVWIFRTSSSQPASV-LQKGVTVCWTMTRLTGRAR 214
P+ +YC +W +WI ++ QP V Q+ + W+ GRA+
Sbjct: 816 PLVKYCPPELWRMWI--SNLLQPLFVHCQQALDFSWSSLLREGRAK 859
>04_04_0265 +
24040689-24041051,24041210-24041457,24041845-24042365,
24042433-24042968
Length = 555
Score = 28.3 bits (60), Expect = 8.3
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -3
Query: 150 AISVRSELRASASTTAEWRRAMSRSGACQHVS 55
A+S+R+ELR +A+W + M R H +
Sbjct: 185 AMSLRNELRGPRQNSADWYKYMQRGAEAVHAA 216
>03_06_0614 -
35099225-35099461,35099545-35099694,35099919-35100066,
35100152-35100231,35100428-35100594,35100692-35100940,
35101025-35102310,35102423-35102544,35102946-35103272
Length = 921
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -3
Query: 372 LPPTRNEGPMSQYCKASMWLVWIFRTSSSQPASVLQKGVTVCWTMTRLT 226
LP T + G S K S + R SSS +S +QK V+VC T T T
Sbjct: 381 LPRTGHSGRSSGGSKRSFGAKGLIRRSSSF-SSDIQKDVSVCTTTTEQT 428
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 28.3 bits (60), Expect = 8.3
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 91 PPPLGSCTRARSQLASHRNSS 153
PP LGSC+R R A H N S
Sbjct: 221 PPELGSCSRLRVLKAGHNNLS 241
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,243,795
Number of Sequences: 37544
Number of extensions: 524469
Number of successful extensions: 2364
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 2225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2361
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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