Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_M03
(870 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67; Eukaryo... 263 5e-69
UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107; Fungi/... 250 3e-65
UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57; Eukaryo... 213 6e-54
UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|R... 183 6e-45
UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-gr... 177 2e-43
UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4... 177 3e-43
UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, wh... 166 6e-40
UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative; ... 164 3e-39
UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas ... 142 1e-32
UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;... 140 6e-32
UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1; Encephal... 121 3e-26
UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951, ... 103 6e-21
UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1; ... 89 1e-16
UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31; Archa... 66 3e-15
UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillard... 84 5e-15
UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;... 73 1e-11
UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1; Methan... 64 3e-09
UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus... 56 1e-06
UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12; Archa... 56 2e-06
UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8; Euryar... 55 2e-06
UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2; Methan... 50 8e-05
UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3; Thermo... 41 2e-04
UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella... 46 0.001
UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2; environm... 42 0.027
UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2; Thermo... 37 0.77
UniRef50_Q9FXA1 Cluster: F14J22.4 protein; n=2; Arabidopsis thal... 35 3.1
UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin oxid... 35 3.1
UniRef50_P13983 Cluster: Extensin precursor; n=1; Nicotiana taba... 34 4.1
UniRef50_Q4A373 Cluster: Putative lectin protein precursor; n=1;... 33 7.1
UniRef50_Q0IFJ1 Cluster: ATP-dependent RNA helicase; n=2; Coelom... 33 7.1
UniRef50_Q4DD51 Cluster: Putative uncharacterized protein; n=2; ... 33 9.4
>UniRef50_Q9W5R8 Cluster: 60S ribosomal protein L5; n=67;
Eukaryota|Rep: 60S ribosomal protein L5 - Drosophila
melanogaster (Fruit fly)
Length = 299
Score = 263 bits (644), Expect = 5e-69
Identities = 129/202 (63%), Positives = 143/202 (70%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXX 459
T Q+AY+RIEGD +VCAAYSHELP+YG++VGLTNYAAAY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 460 XXXXXXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKI 639
E+NVEPV +GPGAF C+LDVGL RTTTGARV GAMKGA D G +P S ++
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 640 PXPMMXNPKSSLLXYTRAXILG 705
P KS RA I G
Sbjct: 181 PG-YSAETKSFNADVHRAHIFG 201
>UniRef50_P46777 Cluster: 60S ribosomal protein L5; n=107;
Fungi/Metazoa group|Rep: 60S ribosomal protein L5 - Homo
sapiens (Human)
Length = 297
Score = 250 bits (613), Expect = 3e-65
Identities = 116/181 (64%), Positives = 133/181 (73%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
MGFVKVVKNK YFKRYQVKF+RRREGKTDYYARKRLV+QDKNKYNTPKYR+IVR++N+D+
Sbjct: 1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDI 60
Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXX 459
CQ+AY+RIEGD IVCAAY+HELP+YGVKVGLTNYAAAY
Sbjct: 61 ICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYE 120
Query: 460 XXXXXXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKI 639
EYNVE + PGAF CYLD GL RTTTG +V GA+KGA D G +P S ++
Sbjct: 121 GQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRF 180
Query: 640 P 642
P
Sbjct: 181 P 181
>UniRef50_P49405 Cluster: 60S ribosomal protein L5; n=57;
Eukaryota|Rep: 60S ribosomal protein L5 - Caenorhabditis
elegans
Length = 293
Score = 213 bits (519), Expect = 6e-54
Identities = 104/179 (58%), Positives = 120/179 (67%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXX 459
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 460 XXXXXXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQK 636
+YNVE F LD+GL RTTTG+++ MKG D G VP S +
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESR 178
>UniRef50_Q4GXN1 Cluster: Ribosomal protein L5e; n=3; Coelomata|Rep:
Ribosomal protein L5e - Hister sp. APV-2005
Length = 268
Score = 183 bits (445), Expect = 6e-45
Identities = 81/89 (91%), Positives = 87/89 (97%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
MGFVKVVKNKQYFKR+QVKFKRRREGKTDYYARKRL+VQDKNKYNTPKYRLIVR SN+D+
Sbjct: 1 MGFVKVVKNKQYFKRFQVKFKRRREGKTDYYARKRLIVQDKNKYNTPKYRLIVRFSNRDI 60
Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVK 366
TCQ+AYSRIEGD I+CAAYSHELPRYGVK
Sbjct: 61 TCQIAYSRIEGDKILCAAYSHELPRYGVK 89
>UniRef50_Q00V92 Cluster: T08009 probable ribosomal protein L5-green
alga; n=1; Ostreococcus tauri|Rep: T08009 probable
ribosomal protein L5-green alga - Ostreococcus tauri
Length = 331
Score = 177 bits (432), Expect = 2e-43
Identities = 86/176 (48%), Positives = 107/176 (60%), Gaps = 2/176 (1%)
Frame = +1
Query: 115 VVKNKQYFKRYQVKFKRRREG--KTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQ 288
V K Y RYQVKF RRR G KTDY AR+RL+ QDKNKYN+PKYR +VR +N+DV CQ
Sbjct: 13 VAKTTAYQSRYQVKFARRRLGACKTDYQARQRLITQDKNKYNSPKYRFVVRFTNRDVVCQ 72
Query: 289 VAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXXXXX 468
V Y+ + GD +CAAYSHELP+YG+K GLTNYAA Y+
Sbjct: 73 VVYATLSGDVTICAAYSHELPKYGMKAGLTNYAATYATGLLCARRLLTKYGLADAYEGKT 132
Query: 469 XXXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQK 636
+Y+VE F C+LD GL RT+TGARV A+KGA D G +P + ++
Sbjct: 133 EDLGEDYHVEQGDEEARPFKCFLDTGLVRTSTGARVFAALKGAVDGGLDIPHNEKR 188
>UniRef50_Q4FWT2 Cluster: 60S ribosomal protein L5, putative; n=4;
Leishmania|Rep: 60S ribosomal protein L5, putative -
Leishmania major strain Friedlin
Length = 328
Score = 177 bits (431), Expect = 3e-43
Identities = 89/187 (47%), Positives = 115/187 (61%), Gaps = 6/187 (3%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
M FVKVVKNK YFKR+QVK++RRREGKTDY+AR+++V+QDK K+ +PKYRL+VR++NKD+
Sbjct: 24 MPFVKVVKNKAYFKRFQVKYRRRREGKTDYHARRQMVLQDKTKFGSPKYRLVVRITNKDI 83
Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXX 459
Q+ ++I GD +V AAY+HELP +G++ GLTNYAAAY+
Sbjct: 84 IAQIVQAKIVGDEVVMAAYAHELPAFGIEHGLTNYAAAYATGLLLARRTLAKLGIADKFQ 143
Query: 460 XXXXXXXXEYNVEPVXNGPG------AFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVP 621
V + G F LDVGL RTTTGARV G +KGA D G VP
Sbjct: 144 GAKEADGSYSAVRTKKDDEGDDEERFPFKAILDVGLARTTTGARVFGVLKGAVDGGMAVP 203
Query: 622 XSXQKIP 642
+ P
Sbjct: 204 HRPNRFP 210
>UniRef50_A0BUQ3 Cluster: Chromosome undetermined scaffold_13, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_13,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 338
Score = 166 bits (404), Expect = 6e-40
Identities = 86/189 (45%), Positives = 113/189 (59%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
M FVK+VK YFKR+Q KF+RRREGKTDYYAR RL+VQDK+KYN+PKYR +VR +N +
Sbjct: 1 MAFVKLVKGTPYFKRFQTKFRRRREGKTDYYARSRLIVQDKDKYNSPKYRFVVRHTNTKI 60
Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXX 459
CQV Y+ ++GD +V AA S EL R+G+ GLTNYAAAY+
Sbjct: 61 ICQVIYATLKGDKVVAAAESTELKRFGLTSGLTNYAAAYA---TGLLLARRTLKTLKMDK 117
Query: 460 XXXXXXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKI 639
+ N++ P F LD+GL R+T G RV A+KGA D G +P + ++
Sbjct: 118 FYEGNKTIDGNLKTQRERP--FFAVLDIGLVRSTLGNRVFAALKGAADGGIHIPHNNRRF 175
Query: 640 PXPMMXNPK 666
P + N K
Sbjct: 176 PGFSVDNDK 184
>UniRef50_Q4YPV4 Cluster: Ribosomal protein family L5, putative;
n=4; Plasmodium (Vinckeia)|Rep: Ribosomal protein family
L5, putative - Plasmodium berghei
Length = 314
Score = 164 bits (398), Expect = 3e-39
Identities = 87/184 (47%), Positives = 104/184 (56%), Gaps = 3/184 (1%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
M +VKVVKNK YFKRYQVK++RRREGKTDY ARK L++QDKNKYN K R IVR +N +
Sbjct: 1 MAYVKVVKNKAYFKRYQVKYRRRREGKTDYRARKALILQDKNKYNAQKLRFIVRKTNNQI 60
Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXX 459
CQ+A S IEGD I+ A S EL RYG+ VGL NYAAAY+
Sbjct: 61 ICQIASSHIEGDKILSEAKSKELIRYGIPVGLKNYAAAYATGLLCARRFLKSLNLDNQFI 120
Query: 460 XXXXXXXXEYNVEPVXNGPG---AFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSX 630
+ G +LDVG+ RTTTG RV A+KGA D G +P
Sbjct: 121 GVEKVTSESVAEDGDKEEEGDRKPIKAFLDVGITRTTTGNRVFAALKGACDGGLNIPHGN 180
Query: 631 QKIP 642
+ P
Sbjct: 181 NRFP 184
>UniRef50_Q76KT0 Cluster: Ribosomal protein L5; n=4; Trichomonas
vaginalis|Rep: Ribosomal protein L5 - Trichomonas
vaginalis
Length = 308
Score = 142 bits (343), Expect = 1e-32
Identities = 75/170 (44%), Positives = 94/170 (55%)
Frame = +1
Query: 112 KVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQV 291
K+VKN YF R+Q KF+RRRE KTDY R +L+ QDK KY KYRL+ R++N V Q+
Sbjct: 4 KLVKNAGYFSRFQTKFRRRREAKTDYVQRTQLIQQDKTKYGAAKYRLVARITNTKVIAQI 63
Query: 292 AYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXXXXXX 471
+ + GD VC A S ELP+YG+K+GL+NY AAY+
Sbjct: 64 VVAELTGDKTVCQALSTELPKYGIKLGLSNYPAAYA---TGLLVARRFLTQMKLADVFKT 120
Query: 472 XXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVP 621
EY + P F LDVGL RTTTGA+V MKGA D G +P
Sbjct: 121 EITEEYLNDEENRRP--FKVILDVGLARTTTGAKVFAVMKGAVDGGLFIP 168
>UniRef50_Q231U7 Cluster: Ribosomal L18p/L5e family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal L18p/L5e
family protein - Tetrahymena thermophila SB210
Length = 590
Score = 140 bits (338), Expect = 6e-32
Identities = 67/164 (40%), Positives = 92/164 (56%)
Frame = +1
Query: 151 VKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCA 330
++ K+ +G TDYYARKRL++QDK+KYNTPKYRL+ R +N + Q+ Y+ ++ D ++CA
Sbjct: 307 IQIKQNYQGLTDYYARKRLIIQDKDKYNTPKYRLVARATNTRIIAQIVYATLKCDRVLCA 366
Query: 331 AYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXEYNVEPVXN 510
A S+EL R+GV GL +YAAAY+ +NV+
Sbjct: 367 ADSYELKRFGVSTGLASYAAAYATGLLLARRLLKQIGLDTVYAGQTKVDGAYFNVDEDQK 426
Query: 511 GPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKIP 642
F LD GL RTTTG RV G +KGA D G +P S + P
Sbjct: 427 EKKPFKAILDAGLVRTTTGNRVFGVLKGACDGGINIPHSESRFP 470
Score = 45.2 bits (102), Expect = 0.002
Identities = 20/31 (64%), Positives = 25/31 (80%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 192
+GFVKV+K K YFKR+Q K++RRR GK YY
Sbjct: 13 LGFVKVLKTKAYFKRFQTKYRRRR-GKQLYY 42
>UniRef50_Q8SRQ3 Cluster: 60S RIBOSOMAL PROTEIN L5; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L5 -
Encephalitozoon cuniculi
Length = 283
Score = 121 bits (291), Expect = 3e-26
Identities = 67/171 (39%), Positives = 92/171 (53%), Gaps = 1/171 (0%)
Frame = +1
Query: 127 KQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRI 306
+ Y K +QVK +RRREGKTDY R ++ QD N + K+RL+VR++ V CQ+ + +
Sbjct: 4 RNYHKNFQVKRRRRREGKTDYKHRTNMIRQDSNSCGSVKHRLVVRITGSRVICQIVAAYM 63
Query: 307 EGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXE 486
+GD ++ A S EL RYG+ G TNY+AAY+
Sbjct: 64 DGDRVMVYADSRELERYGINFGATNYSAAYA--TGFLIGRRALTAMSLDEVYRPKEIDGT 121
Query: 487 YNVEPVXNG-PGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQK 636
Y+V +G A +LD+GL R+T GARV GA+KGA D G VP S K
Sbjct: 122 YSVTKDIDGEKKAPRVFLDIGLARSTRGARVFGALKGASDAGLNVPHSAAK 172
>UniRef50_A7R8T7 Cluster: Chromosome undetermined scaffold_2951,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_2951, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 117
Score = 103 bits (247), Expect = 6e-21
Identities = 46/72 (63%), Positives = 55/72 (76%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
+ FVK K + Y KR+QVKFKRRR GKTDY AR RL+ QDKNKYNTPKYR +VR +NKD+
Sbjct: 12 LAFVKAQKTRAYSKRFQVKFKRRRAGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI 71
Query: 280 TCQVAYSRIEGD 315
T Q+ + I GD
Sbjct: 72 TAQIISASIAGD 83
>UniRef50_Q3LRT7 Cluster: Putative uncharacterized protein; n=1;
Theileria sp. CAAS-2005|Rep: Putative uncharacterized
protein - Theileria sp. CAAS-2005
Length = 255
Score = 89.4 bits (212), Expect = 1e-16
Identities = 52/127 (40%), Positives = 62/127 (48%)
Frame = +1
Query: 262 LSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXX 441
++NK V CQV S + GD + +A S EL YGVKVGLTNYAAAY
Sbjct: 4 VTNKRVICQVVSSTLVGDKVHASADSAELVHYGVKVGLTNYAAAYCTGLLLARRLLTKLK 63
Query: 442 XXXXXXXXXXXXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVP 621
Y+VE N F LDVG+ TTG RV GA+KGA D G VP
Sbjct: 64 LDSQFVGKLEVDGEVYHVEEEENERRPFKALLDVGVKNVTTGNRVFGALKGACDGGLHVP 123
Query: 622 XSXQKIP 642
S ++ P
Sbjct: 124 HSEKRFP 130
>UniRef50_Q9YF94 Cluster: 50S ribosomal protein L18P; n=31;
Archaea|Rep: 50S ribosomal protein L18P - Aeropyrum
pernix
Length = 214
Score = 65.7 bits (153), Expect(2) = 3e-15
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +1
Query: 142 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 321
RY+V +RRREGKT+YY R RLV + K R+ VR+SN+ + Q +RIEGD +
Sbjct: 6 RYRVPLRRRREGKTNYYRRFRLV-------KSGKPRMAVRISNEYLWVQFLEARIEGDRV 58
Query: 322 VCAAYSHEL-PRYGVKVGLTNYAAAY 396
+ AA+S EL ++G K N AAY
Sbjct: 59 IAAAHSRELIKKFGWKGDGNNTCAAY 84
Score = 39.5 bits (88), Expect(2) = 3e-15
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = +1
Query: 517 GAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKIP 642
G LDVGL + G+RV A+KGA D G +P S + +P
Sbjct: 98 GVREAVLDVGLHKPVKGSRVFAALKGALDAGVEIPHSEEILP 139
>UniRef50_Q9AVW3 Cluster: 60S ribosomal protein L5; n=1; Guillardia
theta|Rep: 60S ribosomal protein L5 - Guillardia theta
(Cryptomonas phi)
Length = 232
Score = 83.8 bits (198), Expect = 5e-15
Identities = 51/172 (29%), Positives = 80/172 (46%)
Frame = +1
Query: 124 NKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSR 303
N Y R+++K +RRR GKTDY R +L+ QDK K+ K R+I+R S ++++ Q+ S
Sbjct: 9 NASYHSRFKLKKRRRRIGKTDYKKRMKLIRQDKKKFENKKKRIIIRFSKRNLSLQMVNSN 68
Query: 304 IEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXX 483
++GD I+ ++Y L + K NY +Y
Sbjct: 69 VDGDFILLSSYLKNLSKLEYKNLTNNYPFSY-----------LLGYYFGKDLIEKVKQSE 117
Query: 484 EYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKI 639
YN + N +D+GL R T G + +MKG+ D G +P + KI
Sbjct: 118 TYNKK---NYSSKITAIIDIGLKRATIGNKSFASMKGSVDSGINIPHNYNKI 166
>UniRef50_UPI0000F2C2C1 Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 161
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/49 (65%), Positives = 40/49 (81%)
Frame = +1
Query: 250 LIVRLSNKDVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAY 396
+IV +N+ + CQ+AY+ E D IVCAAY+HELP+ GVKVGLTNYAAAY
Sbjct: 1 MIVLATNRGIICQIAYAGNECDMIVCAAYAHELPKSGVKVGLTNYAAAY 49
Score = 34.3 bits (75), Expect = 4.1
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +1
Query: 544 GLXRTTTGARVXGAMKGAXDRGXXVPXSXQKIP 642
GL RTTTG +V GA+K D G +P S + P
Sbjct: 71 GLARTTTGNKVFGALKEPVDCGLSIPHSTKCFP 103
>UniRef50_A3CT16 Cluster: Ribosomal protein L18P/L5E; n=1;
Methanoculleus marisnigri JR1|Rep: Ribosomal protein
L18P/L5E - Methanoculleus marisnigri (strain ATCC 35101
/ DSM 1498 / JR1)
Length = 175
Score = 64.5 bits (150), Expect = 3e-09
Identities = 36/85 (42%), Positives = 48/85 (56%)
Frame = +1
Query: 142 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 321
RY V F+RR EGKTDYY R L+ TP R++VR +N+ + Q+ +EGD
Sbjct: 6 RYFVPFRRRHEGKTDYYKRMSLLSS-----GTP--RMVVRKTNRQIIVQLVVPEVEGDST 58
Query: 322 VCAAYSHELPRYGVKVGLTNYAAAY 396
+ AAYS EL YG + + AAY
Sbjct: 59 LVAAYSAELAGYGYEGSTASTPAAY 83
Score = 39.1 bits (87), Expect = 0.14
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +1
Query: 535 LDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKIP 642
LD+GL R GARV A+KGA D G VP +P
Sbjct: 103 LDIGLARAKPGARVFAALKGAVDAGLDVPYGESILP 138
>UniRef50_UPI00015535F0 Cluster: PREDICTED: cadherin 18; n=1; Mus
musculus|Rep: PREDICTED: cadherin 18 - Mus musculus
Length = 339
Score = 56.0 bits (129), Expect = 1e-06
Identities = 22/32 (68%), Positives = 30/32 (93%)
Frame = +1
Query: 148 QVKFKRRREGKTDYYARKRLVVQDKNKYNTPK 243
+++F+R +EGKTDYYARKRL +QDKN+YNTP+
Sbjct: 36 KLRFRRWQEGKTDYYARKRLEIQDKNEYNTPE 67
>UniRef50_Q8PV31 Cluster: 50S ribosomal protein L18P; n=12;
Archaea|Rep: 50S ribosomal protein L18P - Methanosarcina
mazei (Methanosarcina frisia)
Length = 174
Score = 55.6 bits (128), Expect = 2e-06
Identities = 32/85 (37%), Positives = 49/85 (57%)
Frame = +1
Query: 142 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 321
RY+V F+RRREG+T+Y+ R +L++ ++ R++VR S ++V Q+ EGD
Sbjct: 6 RYKVPFRRRREGRTNYHLRLKLLLSGQD-------RVVVRKSARNVQIQLLAPTPEGDIT 58
Query: 322 VCAAYSHELPRYGVKVGLTNYAAAY 396
+A S EL +YG N AAY
Sbjct: 59 YSSAVSSELAKYGYTGATGNTTAAY 83
Score = 35.9 bits (79), Expect = 1.3
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 535 LDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKIP 642
LD+GL ++ G+RV A+KG D G +P S P
Sbjct: 103 LDIGLQASSAGSRVYAALKGIVDSGFEIPCSSDVFP 138
>UniRef50_P14123 Cluster: 50S ribosomal protein L18P; n=8;
Euryarchaeota|Rep: 50S ribosomal protein L18P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 187
Score = 55.2 bits (127), Expect = 2e-06
Identities = 32/85 (37%), Positives = 46/85 (54%)
Frame = +1
Query: 142 RYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI 321
RY+V +RRRE +TDY+ R RL+ + K RL+ R SNK V Q+ GD
Sbjct: 6 RYKVPMRRRREARTDYHQRLRLL-------KSGKPRLVARKSNKHVRAQLVTLGPNGDDT 58
Query: 322 VCAAYSHELPRYGVKVGLTNYAAAY 396
+ +A+S +L YG + N +AY
Sbjct: 59 LASAHSSDLAEYGWEAPTGNMPSAY 83
>UniRef50_Q2NFX6 Cluster: 50S ribosomal protein L18P; n=2;
Methanobacteriaceae|Rep: 50S ribosomal protein L18P -
Methanosphaera stadtmanae (strain DSM 3091)
Length = 193
Score = 50.0 bits (114), Expect = 8e-05
Identities = 31/84 (36%), Positives = 45/84 (53%)
Frame = +1
Query: 145 YQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIV 324
Y+V+FKRRREGKT+Y R +LV DK R++VR+++ Q+ GD +
Sbjct: 7 YKVQFKRRREGKTNYNKRYKLVDLDKT-------RMVVRITSNHTITQLVKIGENGDETL 59
Query: 325 CAAYSHELPRYGVKVGLTNYAAAY 396
+A S L +G N +AAY
Sbjct: 60 VSATSKNLKEFGWLGNGKNTSAAY 83
>UniRef50_Q9HIS6 Cluster: 50S ribosomal protein L18P; n=3;
Thermoplasma|Rep: 50S ribosomal protein L18P -
Thermoplasma acidophilum
Length = 163
Score = 40.7 bits (91), Expect(2) = 2e-04
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Frame = +1
Query: 157 FKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVA-YSRIEGDHIVCAA 333
FKR+ G TDY R +L+ + + K R IVR++ K V QVA YS I GD I+
Sbjct: 6 FKRKEAGITDYSKRLKLL-KSREK------RFIVRITGKGVIAQVAEYSDI-GDRILFTV 57
Query: 334 YSHELPRYGVKVGLTNYAAAY 396
L +YGV + N Y
Sbjct: 58 TDKTLAKYGVDLRGNNIQVCY 78
Score = 27.5 bits (58), Expect(2) = 2e-04
Identities = 13/42 (30%), Positives = 16/42 (38%)
Frame = +1
Query: 517 GAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKIP 642
G LD G + G R+ +KG D G VP P
Sbjct: 92 GVESAVLDTGRRKFRKGGRIAACLKGFTDAGIEVPHGEDVFP 133
>UniRef50_Q3LVV6 Cluster: Ribosomal protein L5; n=1; Bigelowiella
natans|Rep: Ribosomal protein L5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 252
Score = 46.4 bits (105), Expect = 0.001
Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYAR--KRLVVQDKNKYNTPKYRLIVRLSNK 273
M + K++KN YF ++ VK +R R+ T Y R + NK + K+R +N
Sbjct: 1 MIYQKIIKNASYFSKFVVKHRRNRKFLTKYGKSYDSRFLKSYTNK--SKKFRSYFTTTNT 58
Query: 274 DVTCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAY 396
+++ + +S + GD IV A S +L ++G+ N +Y
Sbjct: 59 NLSGVITFSSLSGDTIVAKASSMDLIKFGLIHSKKNLINSY 99
>UniRef50_Q673Q9 Cluster: Ribosomal protein L18/L5; n=2;
environmental samples|Rep: Ribosomal protein L18/L5 -
uncultured marine group II euryarchaeote DeepAnt-JyKC7
Length = 171
Score = 41.5 bits (93), Expect = 0.027
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = +1
Query: 139 KRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDH 318
K +++FKRRR G+TDY R R++ R +VR+SN TCQ+ GD
Sbjct: 5 KNQRLRFKRRRTGETDYRRRMRML-------RGGATRAVVRVSNTQTTCQLINYDSTGDE 57
Query: 319 IVCAAYSHEL-PRYG 360
++ + L R+G
Sbjct: 58 VIISVTGKTLVDRFG 72
Score = 34.7 bits (76), Expect = 3.1
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +1
Query: 535 LDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKIP 642
LDVGL T+G RV A++G D G +P +P
Sbjct: 106 LDVGLAAATSGNRVFAALRGMVDAGLDIPHGADVLP 141
>UniRef50_Q6L1A8 Cluster: 50S ribosomal protein L18P; n=2;
Thermoplasmatales|Rep: 50S ribosomal protein L18P -
Picrophilus torridus
Length = 158
Score = 36.7 bits (81), Expect = 0.77
Identities = 22/65 (33%), Positives = 33/65 (50%)
Frame = +1
Query: 160 KRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAYSRIEGDHIVCAAYS 339
KRRREG TDY R RLV+ + R ++R + K + Q+ EGDH++ +
Sbjct: 8 KRRREGVTDYRKRYRLVISRET-------RAVIRQTRKGLIIQLVDYVPEGDHVLVTVTN 60
Query: 340 HELPR 354
L +
Sbjct: 61 KTLKK 65
>UniRef50_Q9FXA1 Cluster: F14J22.4 protein; n=2; Arabidopsis
thaliana|Rep: F14J22.4 protein - Arabidopsis thaliana
(Mouse-ear cress)
Length = 494
Score = 34.7 bits (76), Expect = 3.1
Identities = 18/48 (37%), Positives = 18/48 (37%)
Frame = +2
Query: 725 PSQSP*TXMMXDSXXQXXPPXYLPPXKSPXXCPFXPXXXXXPPPXPLP 868
PS SP PP PP SP CP P PPP LP
Sbjct: 48 PSPSPEPEPEPADCPPPPPPPPCPPPPSPPPCPPPPSPPPSPPPPQLP 95
>UniRef50_Q9K4U6 Cluster: 15,16-dihydrobiliverdin:ferredoxin
oxidoreductase; n=1; Prochlorococcus marinus|Rep:
15,16-dihydrobiliverdin:ferredoxin oxidoreductase -
Prochlorococcus marinus
Length = 241
Score = 34.7 bits (76), Expect = 3.1
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
+ F +V+ ++YF RY + + D+ ++K + + D NKY +P + L+ S D+
Sbjct: 102 LDFQPLVQEERYFCRYYKDLQILKNRFVDFNSQKTMKIYDSNKYFSP-WVLLYNGSFDDL 160
Query: 280 TCQVA 294
C +A
Sbjct: 161 QCSLA 165
>UniRef50_P13983 Cluster: Extensin precursor; n=1; Nicotiana
tabacum|Rep: Extensin precursor - Nicotiana tabacum
(Common tobacco)
Length = 620
Score = 34.3 bits (75), Expect = 4.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 779 PPXYLPPXKSPXXCPFXPXXXXXPPPXPLP 868
PP Y PP SP P P PPP P P
Sbjct: 286 PPTYSPPPPSPIYSPPPPAYSPSPPPTPTP 315
>UniRef50_Q4A373 Cluster: Putative lectin protein precursor; n=1;
Emiliania huxleyi virus 86|Rep: Putative lectin protein
precursor - Emiliania huxleyi virus 86
Length = 1994
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +2
Query: 779 PPXYLPPXKSPXXCPFXPXXXXXPPPXPLP 868
PP PP SP PF P PPP P P
Sbjct: 496 PPSPPPPPPSPPPSPFLPPPSLPPPPPPSP 525
>UniRef50_Q0IFJ1 Cluster: ATP-dependent RNA helicase; n=2;
Coelomata|Rep: ATP-dependent RNA helicase - Aedes aegypti
(Yellowfever mosquito)
Length = 1131
Score = 33.5 bits (73), Expect = 7.1
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -1
Query: 867 GXGXGGGFXXXXGXXGHXXGDFXGGRYXGGXXXW 766
G GGGF G G G + GG Y GG W
Sbjct: 1098 GGNRGGGFGGNRGGFGGNRGGYGGGGYGGGGRRW 1131
>UniRef50_Q4DD51 Cluster: Putative uncharacterized protein; n=2;
Trypanosoma cruzi|Rep: Putative uncharacterized protein
- Trypanosoma cruzi
Length = 603
Score = 33.1 bits (72), Expect = 9.4
Identities = 16/48 (33%), Positives = 21/48 (43%)
Frame = +2
Query: 725 PSQSP*TXMMXDSXXQXXPPXYLPPXKSPXXCPFXPXXXXXPPPXPLP 868
P+++P T ++ S PP PP P P P PPP P P
Sbjct: 365 PAETPTTSLINPSSALEAPPPPPPPPPPPPPPPPPPAGKAPPPPIPPP 412
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,961,359
Number of Sequences: 1657284
Number of extensions: 12319443
Number of successful extensions: 34576
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 28877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33617
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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