Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M03
         (870 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...   263   4e-72
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    25   4.0  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    24   6.9  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     23   9.2  

>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score =  263 bits (645), Expect = 4e-72
 Identities = 131/203 (64%), Positives = 142/203 (69%)
 Frame = +1

Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
           MGFVKVVKNKQYFKRYQV+F+RRREGKTDYYARKRL+ QDKNKYNTPK+RLIVRLSN+D+
Sbjct: 1   MGFVKVVKNKQYFKRYQVRFRRRREGKTDYYARKRLIFQDKNKYNTPKFRLIVRLSNRDI 60

Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXX 459
           TCQ+AY RIEGD IVCAAYSHELPRYGVKVGLTNYAAAY                     
Sbjct: 61  TCQIAYRRIEGDRIVCAAYSHELPRYGVKVGLTNYAAAYCTGLLVARRILQKLRLDTLYA 120

Query: 460 XXXXXXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQKI 639
                   EY VEPV  GP AF CYLDVGL RTTTG+RV GAMKGA D G  +P S ++ 
Sbjct: 121 GCTDVTGEEYLVEPVDEGPAAFRCYLDVGLARTTTGSRVFGAMKGAVDGGLNIPHSVKRF 180

Query: 640 PXPMMXNPKSSLLXYTRAXILGL 708
           P     N KS      R  I GL
Sbjct: 181 PGYSAEN-KSFNAEMHRDHIFGL 202


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +1

Query: 22  YREFLKICLFAWCPSC 69
           +REFL +C FA  P C
Sbjct: 932 FREFLHVCGFAPSPEC 947


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.8 bits (49), Expect = 6.9
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 809 PXXCPFXPXXXXXPPPXPLP 868
           P   PF P     P P PLP
Sbjct: 790 PSNAPFTPPTDRTPTPPPLP 809


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 23.4 bits (48), Expect = 9.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 337 NKQRTQYGHLQSESRPPGML 278
           +KQ  +Y H   E +PPG L
Sbjct: 152 SKQALKYYHYYLEGQPPGQL 171


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 739,615
Number of Sequences: 2352
Number of extensions: 13523
Number of successful extensions: 32
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93026475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)