Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_M03
(870 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 213 2e-55
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 30 2.5
L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family ... 30 2.5
L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family ... 30 2.5
L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family ... 30 2.5
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 28 7.5
Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical pr... 28 10.0
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 28 10.0
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 213 bits (519), Expect = 2e-55
Identities = 104/179 (58%), Positives = 120/179 (67%)
Frame = +1
Query: 100 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 279
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 280 TCQVAYSRIEGDHIVCAAYSHELPRYGVKVGLTNYAAAYSXXXXXXXXXXXXXXXXXXXX 459
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY+
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 460 XXXXXXXXEYNVEPVXNGPGAFXCYLDVGLXRTTTGARVXGAMKGAXDRGXXVPXSXQK 636
+YNVE F LD+GL RTTTG+++ MKG D G VP S +
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESR 178
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 334 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 221
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 29.9 bits (64), Expect = 2.5
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = -3
Query: 334 KQRTQYGHLQSESRPPGMLHLCWRDAQSDDI*VCYI-CS 221
+QR ++ + + P HLC R+++ DI CYI CS
Sbjct: 980 RQRVSCVKMEGDRQTPASEHLCDRNSKPSDIASCYIDCS 1018
>L25598-4|AAV58888.1| 737|Caenorhabditis elegans Calpain family
protein 1, isoform b protein.
Length = 737
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 861 GXGGGFXXXXGXXGHXXGDFXGGRYXGG 778
G GGGF G G G GG+Y GG
Sbjct: 120 GGGGGFGDILGGIGSLIGGGGGGQYNGG 147
>L25598-3|AAM15551.1| 759|Caenorhabditis elegans Calpain family
protein 1, isoform d protein.
Length = 759
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 861 GXGGGFXXXXGXXGHXXGDFXGGRYXGG 778
G GGGF G G G GG+Y GG
Sbjct: 145 GGGGGFGDILGGIGSLIGGGGGGQYNGG 172
>L25598-2|AAV58887.1| 780|Caenorhabditis elegans Calpain family
protein 1, isoform a protein.
Length = 780
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -1
Query: 861 GXGGGFXXXXGXXGHXXGDFXGGRYXGG 778
G GGGF G G G GG+Y GG
Sbjct: 166 GGGGGFGDILGGIGSLIGGGGGGQYNGG 193
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/22 (45%), Positives = 11/22 (50%)
Frame = +2
Query: 797 PXKSPXXCPFXPXXXXXPPPXP 862
P SP CP+ P PPP P
Sbjct: 74 PRPSPSCCPYVPPAPLPPPPPP 95
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 229 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 348
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -1
Query: 867 GXGXGGGFXXXXGXXGHXXGDFXGGRYXGG 778
G G GG+ G G+ G GG Y GG
Sbjct: 189 GGGGMGGYGGGMGGGGYGGGGMGGGGYGGG 218
>Z93390-6|CAB07675.4| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 376 SDQPSHHNVATHVNKQRTQYGHLQSESRP 290
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z93390-1|CAE46674.1| 540|Caenorhabditis elegans Hypothetical
protein T23B5.3b protein.
Length = 540
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 376 SDQPSHHNVATHVNKQRTQYGHLQSESRP 290
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z80214-7|CAC42261.2| 816|Caenorhabditis elegans Hypothetical
protein T23B5.3a protein.
Length = 816
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -3
Query: 376 SDQPSHHNVATHVNKQRTQYGHLQSESRP 290
SD P HH +H + Q Q HLQ P
Sbjct: 17 SDVPMHHVYPSHHHHQHYQLPHLQQHPHP 45
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 27.9 bits (59), Expect = 10.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = -1
Query: 855 GGGFXXXXGXXGHXXGDFXGGRYXGG 778
G + G G+ GDF GG Y GG
Sbjct: 355 GNDYGNDYGNAGYDSGDFGGGDYGGG 380
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,202,178
Number of Sequences: 27780
Number of extensions: 309809
Number of successful extensions: 861
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 772
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 858
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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