Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_M02
         (844 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    25   0.57 
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   4.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   4.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   7.0  

>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 25.4 bits (53), Expect = 0.57
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +3

Query: 252 ETATNLSTTVHITWTLPKADLTSSLPPFP 338
           E  TN+ T+     T P+    SSLPP+P
Sbjct: 461 ELGTNIYTSSKRQRTSPQLSPMSSLPPYP 489


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/45 (26%), Positives = 13/45 (28%)
 Frame = +2

Query: 620 PPXXKKXXXGXPPPPPPXXXXXPXXPXSXPXXXPXXPXXPPPXXP 754
           PP          PPPPP        P + P         PP   P
Sbjct: 202 PPTEDCDVPSTIPPPPPEEDDDSNIPQNNPKNKQHNFNLPPGAIP 246


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +3

Query: 231  PKITTLMETATNLSTTVHITWTLPKADLTSSLPPFP 338
            P++TT ++T  + +  +H  WT   +   SS    P
Sbjct: 1015 PQVTTGVDTGASSTEHMHPDWTTKPSTWWSSTTTSP 1050


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
 Frame = +2

Query: 179 SGNGYEPIDNR--PYIVNPPKDYNPNGNGYE 265
           S +G++  D    P+IV  P++ NP+   Y+
Sbjct: 179 SHSGFQRSDGTFGPFIVRVPEEDNPHAKLYD 209


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,196
Number of Sequences: 336
Number of extensions: 2943
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23244256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)