Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_M01
(869 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 26 0.34
AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein. 25 0.59
AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate neu... 23 3.1
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 22 5.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 7.2
AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone recepto... 22 7.2
AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B prot... 22 7.2
U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I pr... 21 9.5
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 26.2 bits (55), Expect = 0.34
Identities = 14/43 (32%), Positives = 14/43 (32%), Gaps = 3/43 (6%)
Frame = +1
Query: 484 PPXXPXPX---PPPXXPPPXXXXXXXPXXPPPPXXPXXPXXPP 603
P P P P P PP P P P P P PP
Sbjct: 149 PKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPP 191
Score = 25.8 bits (54), Expect = 0.44
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 491 PPXXPXPPXXPXPPPPPXPXXPXPPPPPXXPXXXXXPPPPXXXPXXXPXPPXXXP 655
PP P P P P P PP PP P P P PP P
Sbjct: 139 PPGNVLNLTMPKYEPNPSIIDPGPALPPTGFLCNNYPPLPQVPP--LPLPPIFPP 191
Score = 24.6 bits (51), Expect = 1.0
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +3
Query: 561 PPPPXXXPXPXXPPPPPXXXXPXPPPXPXXPPXXXXPPPPP 683
P P P P PP PP P PP P PP
Sbjct: 153 PNPSIIDPGPALPPT--GFLCNNYPPLPQVPPLPLPPIFPP 191
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 536 PPXPXXPXPPPPPXXPXXXXXP 601
PP P P P PP P P
Sbjct: 175 PPLPQVPPLPLPPIFPPTMINP 196
Score = 22.6 bits (46), Expect = 4.1
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +2
Query: 521 PXPPPPPXPXXPXPPPPPXXP 583
P P PP P P PP P
Sbjct: 176 PLPQVPPLPLPPIFPPTMINP 196
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +3
Query: 561 PPPPXXXPXPXXPPPPPXXXXP 626
PP P P P P PP P
Sbjct: 175 PPLPQVPPLPLPPIFPPTMINP 196
>AY008296-1|AAG22858.1| 556|Tribolium castaneum Dorsal protein.
Length = 556
Score = 25.4 bits (53), Expect = 0.59
Identities = 12/42 (28%), Positives = 12/42 (28%)
Frame = +3
Query: 588 PXXPPPPPXXXXPXPPPXPXXPPXXXXPPPPPXPXXXXXXPP 713
P P P P P P P PP P PP
Sbjct: 393 PRDKAPSPYGGQMFEAPIPNVSPHYVTPTPPEAPLFQNVLPP 434
>AY695257-1|AAW21974.1| 224|Tribolium castaneum intermediate
neuroblasts defectiveprotein protein.
Length = 224
Score = 23.0 bits (47), Expect = 3.1
Identities = 12/44 (27%), Positives = 12/44 (27%)
Frame = +1
Query: 472 PXPXPPXXPXPXPPPXXPPPXXXXXXXPXXPPPPXXPXXPXXPP 603
P PP P P P P PP P P P
Sbjct: 68 PVALPPKREIPSPKRSSPILAEKVSVSPTTPPTPSPPPEERLTP 111
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 22.2 bits (45), Expect = 5.5
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = -1
Query: 869 GGGGGGGXXXXGGXGG 822
GGG GGG G GG
Sbjct: 92 GGGRGGGRDGDRGDGG 107
Score = 21.8 bits (44), Expect = 7.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 582 GXXGGGGGXGXXGXGGG 532
G GGG G G GGG
Sbjct: 92 GGGRGGGRDGDRGDGGG 108
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 7.2
Identities = 12/39 (30%), Positives = 12/39 (30%), Gaps = 2/39 (5%)
Frame = +3
Query: 522 PXPXXXPXXGXPXPPPPXXXPXPXXPPPP--PXXXXPXP 632
P P G PPP P P P P P P
Sbjct: 1074 PTTTNWPTQGTTIPPPAVVMPEVDKPSQPCEPGQYVPDP 1112
>AM295015-1|CAL25730.1| 549|Tribolium castaneum ecdysone receptor
(isoform A) protein.
Length = 549
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 494 PXXPXPPXXPXPPPPPXP 547
P PP P P PP P
Sbjct: 110 PSGNVPPLTPSPGPPSHP 127
>AF227923-1|AAF36721.1| 351|Tribolium castaneum abdominal-B
protein.
Length = 351
Score = 21.8 bits (44), Expect = 7.2
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 533 PPPXPXXPXPPP 568
P P P P PPP
Sbjct: 205 PEPVPSTPYPPP 216
>U04271-1|AAA03708.1| 490|Tribolium castaneum alpha-amylase I
protein.
Length = 490
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +2
Query: 104 FVVAAVGYVTGQHFPT 151
FV +GY QHF T
Sbjct: 421 FVAFTIGYDLNQHFET 436
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,997
Number of Sequences: 336
Number of extensions: 7156
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23996456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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