Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L23
         (873 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    25   0.59 
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    25   0.59 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    24   1.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.4  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   2.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   4.1  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   9.6  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   9.6  

>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 635 NSALEKDSGTNSLGPRYGAFENVKTSSYL*NSRILL 742
           N  + KD+  +  GPR       + SSY   SR+++
Sbjct: 102 NVGMNKDAVQHERGPRNSTLRRQQMSSYYNESRVMM 137


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 25.4 bits (53), Expect = 0.59
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +2

Query: 635 NSALEKDSGTNSLGPRYGAFENVKTSSYL*NSRILL 742
           N  + KD+  +  GPR       + SSY   SR+++
Sbjct: 102 NVGMNKDAVQHERGPRNSTLRRQQMSSYYNESRVMM 137


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 4/52 (7%)
 Frame = -1

Query: 378 IWKSDICWFFRPV---MFKFLKRITTPASFGAITSNDVTTSGSIGH-MSYCG 235
           IWK+ + W+   V   + +FL+ + T AS   + +  +    +I H M + G
Sbjct: 83  IWKTTVAWYAGNVACKVIRFLQVVVTYASTYVLVALSIDRYDAIRHPMKFSG 134


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/22 (54%), Positives = 15/22 (68%), Gaps = 2/22 (9%)
 Frame = +3

Query: 462 NRSP--SQDFTRPIQMSLELSG 521
           NR P  +QD  R ++MSLE SG
Sbjct: 137 NRKPDDNQDHLRRLEMSLEKSG 158


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 12/34 (35%), Positives = 17/34 (50%)
 Frame = +2

Query: 497 TNVIGAVRYGYNLKNDDNGVQHFEVQPETFTCES 598
           T+ + + R  Y   N  N    FEVQ  T+ CE+
Sbjct: 17  TDNVSSTRTKYLRTNFPNFYNDFEVQRYTWKCEN 50


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 572 QPETFTCESIGEPKVTLS 625
           +P TFTC   G P  T+S
Sbjct: 343 RPATFTCNFEGNPIKTIS 360


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +2

Query: 425 HIVGDIVIELTKQSKSFTGLYTADTNVIGA 514
           H+V +I   L + +  F    TA T VIGA
Sbjct: 270 HLVEEIERSLREGAAPFMVSATAGTTVIGA 299


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 477 VKDFDCLVNSI 445
           + DFDC +NSI
Sbjct: 372 ISDFDCDINSI 382


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 199,212
Number of Sequences: 336
Number of extensions: 4274
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24099889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)