Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L23
         (873 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,200...    34   0.13 
12_01_1110 + 11756814-11757485,11757566-11757644,11757705-117579...    28   8.5  

>03_01_0261 -
           2007522-2007590,2007684-2007926,2008008-2008106,
           2008214-2008693,2008806-2008904,2009097-2009218,
           2009296-2009414,2009492-2009559,2009832-2010017,
           2010323-2010425,2010477-2010556,2010638-2010694,
           2010771-2010913,2010988-2011132,2011501-2011662,
           2011759-2011944,2012273-2012365,2012893-2013053,
           2013440-2013547,2013664-2013928
          Length = 995

 Score = 34.3 bits (75), Expect = 0.13
 Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
 Frame = -1

Query: 669 ELVPESFSNALFKSELR-VTFGSPMLSHVNVSGWTSKC*TPLSSFFKL*PYLTAPMTFVS 493
           E+V  S    +FKS    +T G+PM + ++VS  T     P S++    PY    MT   
Sbjct: 699 EVVKSSVLPDMFKSTYEAITKGNPMWNELSVSASTLYPWDPTSTYIHEPPYF-KDMTMSP 757

Query: 492 AV*SPVKDFDCLVN 451
               PVKD  CL+N
Sbjct: 758 PGPRPVKDAYCLLN 771


>12_01_1110 +
           11756814-11757485,11757566-11757644,11757705-11757991,
           11758072-11758131,11758311-11758976
          Length = 587

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 611 KVTLSSDLNSALEKDSGTNSLGPRYGAFENVKTSSY 718
           K+    D++SAL  D   N  GP+ G+ EN++ + +
Sbjct: 154 KIQCRGDISSALMMDRLLNIPGPQLGSIENIEFARF 189


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,816,305
Number of Sequences: 37544
Number of extensions: 449965
Number of successful extensions: 941
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)