Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L22
         (881 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6YPK4 Cluster: Cytochrome c oxidase; n=3; Neoptera|Rep...    97   5e-19
UniRef50_Q9VMS1 Cluster: CG14028-PA; n=6; Diptera|Rep: CG14028-P...    77   5e-13
UniRef50_P09669 Cluster: Cytochrome c oxidase polypeptide VIc pr...    71   4e-11
UniRef50_P04038 Cluster: Cytochrome c oxidase polypeptide VIc; n...    71   5e-11
UniRef50_Q4PM34 Cluster: Cytochrome c oxidase subunit VIc; n=1; ...    69   2e-10
UniRef50_UPI00015548E5 Cluster: PREDICTED: similar to cytochrome...    66   1e-09
UniRef50_UPI0000587B5E Cluster: PREDICTED: similar to cytochrome...    65   2e-09
UniRef50_UPI00004477A4 Cluster: PREDICTED: hypothetical protein;...    56   9e-07
UniRef50_Q8T970 Cluster: AT20031p; n=2; Sophophora|Rep: AT20031p...    47   7e-04
UniRef50_A7GNI6 Cluster: Glycosyl transferase group 1; n=1; Baci...    35   2.4  
UniRef50_Q7SAZ9 Cluster: Putative uncharacterized protein NCU076...    34   5.5  
UniRef50_UPI00015B6329 Cluster: PREDICTED: similar to conserved ...    33   7.3  

>UniRef50_A6YPK4 Cluster: Cytochrome c oxidase; n=3; Neoptera|Rep:
           Cytochrome c oxidase - Triatoma infestans (Assassin bug)
          Length = 76

 Score = 97.1 bits (231), Expect = 5e-19
 Identities = 44/73 (60%), Positives = 59/73 (80%)
 Frame = +3

Query: 120 SAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEK 299
           SAVST+ KPQ+RGLL++ IKRN+I+ L LS  +GF FK  IG+ RK++YAEFY+ YDAE+
Sbjct: 3   SAVSTSVKPQLRGLLHSQIKRNLIIGLVLSISSGFLFKTFIGDARKKQYAEFYKNYDAEE 62

Query: 300 EFEEMRKKGLFQS 338
           +F+ M+  GLFQS
Sbjct: 63  DFKRMKSLGLFQS 75


>UniRef50_Q9VMS1 Cluster: CG14028-PA; n=6; Diptera|Rep: CG14028-PA -
           Drosophila melanogaster (Fruit fly)
          Length = 77

 Score = 77.4 bits (182), Expect = 5e-13
 Identities = 38/78 (48%), Positives = 49/78 (62%)
 Frame = +3

Query: 108 MAGESAVSTASKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTY 287
           MA   A S+A  P +RGL NA IKRN+ V+L L+ V    +K L+ + +K  YA+FY  Y
Sbjct: 1   MANTPATSSAG-PVLRGLHNATIKRNLAVSLGLTAVVTIAYKILVNDPKKAAYADFYSKY 59

Query: 288 DAEKEFEEMRKKGLFQSC 341
           DA K FE M+  G FQSC
Sbjct: 60  DANKSFERMKAAGRFQSC 77


>UniRef50_P09669 Cluster: Cytochrome c oxidase polypeptide VIc
           precursor; n=36; Euteleostomi|Rep: Cytochrome c oxidase
           polypeptide VIc precursor - Homo sapiens (Human)
          Length = 75

 Score = 70.9 bits (166), Expect = 4e-11
 Identities = 35/67 (52%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
 Frame = +3

Query: 141 KPQMRGLLNAVIKRNIIVALALS-GVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMR 317
           KP+MRGLL   ++ ++ VA  LS GVA   +K  + ++RK+ YA+FYR YD  K+FEEMR
Sbjct: 8   KPRMRGLLARRLRNHMAVAFVLSLGVAAL-YKFRVADQRKKAYADFYRNYDVMKDFEEMR 66

Query: 318 KKGLFQS 338
           K G+FQS
Sbjct: 67  KAGIFQS 73


>UniRef50_P04038 Cluster: Cytochrome c oxidase polypeptide VIc; n=5;
           Bos taurus|Rep: Cytochrome c oxidase polypeptide VIc -
           Bos taurus (Bovine)
          Length = 73

 Score = 70.5 bits (165), Expect = 5e-11
 Identities = 38/72 (52%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
 Frame = +3

Query: 129 STA-SKPQMRGLLNAVIKRNIIVALALS-GVAGFTFKQLIGNERKRKYAEFYRTYDAEKE 302
           STA +KPQMRGLL   ++ +I+ A  +S G A F +K  +  +RK+ YA+FYR YD+ K+
Sbjct: 1   STALAKPQMRGLLARRLRFHIVGAFMVSLGFATF-YKFAVAEKRKKAYADFYRNYDSMKD 59

Query: 303 FEEMRKKGLFQS 338
           FEEMRK G+FQS
Sbjct: 60  FEEMRKAGIFQS 71


>UniRef50_Q4PM34 Cluster: Cytochrome c oxidase subunit VIc; n=1;
           Ixodes scapularis|Rep: Cytochrome c oxidase subunit VIc
           - Ixodes scapularis (Black-legged tick) (Deer tick)
          Length = 76

 Score = 68.9 bits (161), Expect = 2e-10
 Identities = 30/67 (44%), Positives = 46/67 (68%)
 Frame = +3

Query: 138 SKPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMR 317
           ++PQ  GLL + I++++I+ L+L+GV G  +   +   RK+ YA+FY+TYDA  + E M 
Sbjct: 4   ARPQFHGLLKSYIRKHLIICLSLAGVGGVAWHYGVCEARKKAYADFYKTYDAAADNERMT 63

Query: 318 KKGLFQS 338
           K GLFQS
Sbjct: 64  KLGLFQS 70


>UniRef50_UPI00015548E5 Cluster: PREDICTED: similar to cytochrome c
           oxidase subunit VIc; n=1; Ornithorhynchus anatinus|Rep:
           PREDICTED: similar to cytochrome c oxidase subunit VIc -
           Ornithorhynchus anatinus
          Length = 138

 Score = 66.1 bits (154), Expect = 1e-09
 Identities = 31/66 (46%), Positives = 44/66 (66%)
 Frame = +3

Query: 141 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 320
           KPQMRGLL   ++ +I+ A  +S      +K  +   RK+ YA+FYR YD+ K+FE+MRK
Sbjct: 69  KPQMRGLLAKRLRFHIVGAFTVSMGLAALYKFGVAEPRKKAYADFYRNYDSMKDFEDMRK 128

Query: 321 KGLFQS 338
            G+FQS
Sbjct: 129 AGIFQS 134


>UniRef50_UPI0000587B5E Cluster: PREDICTED: similar to cytochrome c
           oxidase subunit VIc; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to cytochrome c
           oxidase subunit VIc - Strongylocentrotus purpuratus
          Length = 80

 Score = 65.3 bits (152), Expect = 2e-09
 Identities = 29/66 (43%), Positives = 44/66 (66%)
 Frame = +3

Query: 141 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 320
           +P+MRGLL++ + R+ I+   LS       K  + + RK+ Y EFY+TYDA+ +FE MR+
Sbjct: 6   RPKMRGLLSSFLTRHFIIGSVLSLAGAGLVKVFLYDARKKLYTEFYKTYDAQADFERMRE 65

Query: 321 KGLFQS 338
            G+FQS
Sbjct: 66  LGVFQS 71


>UniRef50_UPI00004477A4 Cluster: PREDICTED: hypothetical protein;
           n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
           - Gallus gallus
          Length = 102

 Score = 56.4 bits (130), Expect = 9e-07
 Identities = 29/66 (43%), Positives = 39/66 (59%)
 Frame = +3

Query: 141 KPQMRGLLNAVIKRNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRK 320
           KPQMR LL   +K ++  A  +S      +K  +   RKR YAEFY+ YD  K+FE MR 
Sbjct: 33  KPQMRRLLARRMKFHLFGAFLVSLGCAALYKFGVAEPRKRAYAEFYKNYDPMKDFEAMRA 92

Query: 321 KGLFQS 338
            G+F+S
Sbjct: 93  AGVFES 98


>UniRef50_Q8T970 Cluster: AT20031p; n=2; Sophophora|Rep: AT20031p -
           Drosophila melanogaster (Fruit fly)
          Length = 87

 Score = 46.8 bits (106), Expect = 7e-04
 Identities = 23/54 (42%), Positives = 28/54 (51%)
 Frame = +3

Query: 180 RNIIVALALSGVAGFTFKQLIGNERKRKYAEFYRTYDAEKEFEEMRKKGLFQSC 341
           RN+ +A  L+ +A   F  L  N RKRKY  FY TYD    F+ M   G   SC
Sbjct: 20  RNVKMACTLALLAPLLFYTLHNNPRKRKYRNFYSTYDPMDAFDRMMSGGYLSSC 73


>UniRef50_A7GNI6 Cluster: Glycosyl transferase group 1; n=1;
           Bacillus cereus subsp. cytotoxis NVH 391-98|Rep:
           Glycosyl transferase group 1 - Bacillus cereus subsp.
           cytotoxis NVH 391-98
          Length = 689

 Score = 35.1 bits (77), Expect = 2.4
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
 Frame = +3

Query: 156 GLLNAVIKRNIIVALALSG-VAGFTFKQLIGNERKRKYAEFYRTYDAE 296
           GLLN+VIK  +   + L G + G  + + +  E+ RK AEFY+ YD E
Sbjct: 102 GLLNSVIKE-VFPNIPLVGTIHGCIYSETLMWEKNRKNAEFYKEYDDE 148


>UniRef50_Q7SAZ9 Cluster: Putative uncharacterized protein
           NCU07626.1; n=1; Neurospora crassa|Rep: Putative
           uncharacterized protein NCU07626.1 - Neurospora crassa
          Length = 254

 Score = 33.9 bits (74), Expect = 5.5
 Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
 Frame = -1

Query: 248 ITNELLEGKTSDARESQSNNNVTFDDGVEETSHL---RLARCRYCTF 117
           +T     GKT+ A+    N N+T+ +G + T H+     ARCR CTF
Sbjct: 39  VTGPTACGKTTVAKALAENLNLTYVEGDDPTFHVVCTLTARCRLCTF 85


>UniRef50_UPI00015B6329 Cluster: PREDICTED: similar to conserved
           hypothetical protein; n=1; Nasonia vitripennis|Rep:
           PREDICTED: similar to conserved hypothetical protein -
           Nasonia vitripennis
          Length = 1086

 Score = 33.5 bits (73), Expect = 7.3
 Identities = 23/69 (33%), Positives = 34/69 (49%), Gaps = 6/69 (8%)
 Frame = -1

Query: 305 KFLFSI-IGSVEFSILSLALITNELLEGKTSDARESQSN-----NNVTFDDGVEETSHLR 144
           KF  SI IG V+  + +  L T +  +GK S + E+Q        N+ F     E  HL 
Sbjct: 526 KFFMSIGIGLVQEYVQTDLLRTQKRKQGKGSTSAETQMAINSLIKNLEFSKENNEPYHLE 585

Query: 143 LARCRYCTF 117
           L +C +C+F
Sbjct: 586 LKKCEFCSF 594


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 655,344,144
Number of Sequences: 1657284
Number of extensions: 10480827
Number of successful extensions: 23754
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23751
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)