Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L22
         (881 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    24   1.8  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    24   1.8  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           24   1.8  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    23   4.2  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   7.3  

>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 243 GNERKRKYAEFYRTYDAEKEF 305
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 243 GNERKRKYAEFYRTYDAEKEF 305
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 243 GNERKRKYAEFYRTYDAEKEF 305
           GN+R R+    Y+T + EKEF
Sbjct: 182 GNKRTRQTYTRYQTLELEKEF 202


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 733 FPGGWPDSLRQXKPSHTSPLNXE 665
           F G W     Q  P + SPL+ E
Sbjct: 203 FHGSWAGVTAQNSPLYASPLDGE 225


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 651 GNWWLLTCLLQLIMVTNKAIASQISQNKAFFS 556
           G W     +L  I+ ++K  AS IS   +FFS
Sbjct: 103 GGWNAGNAILNGIVASSKLRASLISSCLSFFS 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,511
Number of Sequences: 336
Number of extensions: 2724
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)