Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L21
(871 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 91 3e-17
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 64 6e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 55 3e-06
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.047
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.082
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 36 1.8
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 35 3.1
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.4
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.4
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 91.1 bits (216), Expect = 3e-17
Identities = 52/79 (65%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
Frame = +1
Query: 535 PLTSITKIDAQVRXGETRQDYKDTRRFP---PGSSLVRSPXSDPAXYRIPVRLSP--LRE 699
PLTSITKIDAQVR GETRQDYKDTRRFP P +L+ P R+P P LRE
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPC------RLPDTCPPFSLRE 75
Query: 700 AWRFLIPHAVXISVRCXSF 756
AWRFLI HAV ISVRC SF
Sbjct: 76 AWRFLIAHAVGISVRCRSF 94
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 484 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 371
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 64.1 bits (149), Expect = 4e-09
Identities = 46/111 (41%), Positives = 56/111 (50%)
Frame = +2
Query: 308 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRX 487
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + + +
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT--------DGDGNFLEDTRKTLSKEEI 77
Query: 488 GTVKRXRCWRFSIXSAP*RASQKSTLKSXVAKPDRTIKIPGVSPLEAPSCA 640
R R RFSI SAP + KS + + + K P PL APSCA
Sbjct: 78 ----RPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCA 124
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 63.7 bits (148), Expect = 6e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Frame = -2
Query: 777 AHSPGWXERXTPN*DTYSVRYEKAPRFPKGRKADRYPXXXXXXXXRAHEGASRGETP 607
A+SP W ER P+ DT SV YEKAPRFPKG+KA++ RAHEGA+ ++P
Sbjct: 30 AYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +2
Query: 284 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 451
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 54.8 bits (126), Expect = 3e-06
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +1
Query: 535 PLTSITKIDAQVRXGETRQDYKDTRRFP 618
PLTSITK DAQ+ GETRQDYKDTRRFP
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRFP 85
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +3
Query: 87 DPDMIRYIDEFGQTTTRMQ 143
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +1
Query: 403 HSKAVIRLSTESGDNAGKNM 462
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.047
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 282 SALMNRPTRGERRFAYW 332
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.082
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 354 ERGSGRAPNTQTASPRALADSLMQ 283
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 35.5 bits (78), Expect = 1.8
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +3
Query: 684 FSPSGSVALSHTSRCXYL 737
F PSGSVALSH+SRC YL
Sbjct: 17 FLPSGSVALSHSSRCRYL 34
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 34.7 bits (76), Expect = 3.1
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = +3
Query: 627 LPRALSXFRPCXLPDTCPPFSPSGSVALSHTS 722
LP ALS P PPFS +GSVALSH+S
Sbjct: 42 LPLALSCSNPAVSRIPVPPFSLAGSVALSHSS 73
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.4
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +3
Query: 165 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 332
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.4
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 245 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 81
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,956,630
Number of Sequences: 1657284
Number of extensions: 13753643
Number of successful extensions: 33176
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 31579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33146
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77472727479
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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