Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L20
(839 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 31 3.9
M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human HLA-B-ass... 31 3.9
BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transc... 31 3.9
BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transc... 31 3.9
BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein. 31 3.9
BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein. 31 3.9
AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transc... 31 3.9
AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated trans... 31 3.9
AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated trans... 31 3.9
AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein. 31 3.9
>M33518-1|AAA35586.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) gene, 3' end. ).
Length = 2142
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1400 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1442
>M33509-1|AAA35585.1| 2142|Homo sapiens protein ( Human
HLA-B-associated transcript 2 (BAT2) mRNA, complete cds.
).
Length = 2142
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1400 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1442
>BX511262-1|CAI95572.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1415 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
>BC060668-1|AAH60668.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1415 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
>BC042295-1|AAH42295.1| 2157|Homo sapiens BAT2 protein protein.
Length = 2157
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1415 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
>BA000025-31|BAB63391.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1415 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
>AL805934-4|CAI18500.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1415 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
>AL662847-63|CAI17698.2| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1415 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
>AL662801-47|CAI18313.1| 2157|Homo sapiens HLA-B associated transcript
2 protein.
Length = 2157
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1415 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
>AF129756-17|AAD18086.1| 2157|Homo sapiens BAT2 protein.
Length = 2157
Score = 31.5 bits (68), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +3
Query: 717 GGGGXGGRXXXXKKKKKKXXAX---AXPPXKKXXXXXPPPPPP 836
GGGG GGR + K+ + + PP ++ PPPPP
Sbjct: 1415 GGGGPGGRTGPGRGDKRSWPSPKNRSRPPEERPPGLPLPPPPP 1457
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,418,007
Number of Sequences: 237096
Number of extensions: 1557201
Number of successful extensions: 22963
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2996
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16014
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10593928420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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