Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L19
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.3  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   4.0  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        22   7.0  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   7.0  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.0  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.0  
AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    22   7.0  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 6/11 (54%), Positives = 10/11 (90%)
 Frame = -3

Query: 436 EWFHQVAKACW 404
           EW+H ++KAC+
Sbjct: 64  EWYHTLSKACY 74


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -3

Query: 370 LQLQMYRVSSIPXGCYITYRQVVDSQLQSKCPIDQC 263
           LQL +Y  + +   CY+TY        +S    D C
Sbjct: 133 LQLFLYIFTYLSVTCYVTYAWSPIDHTESNIINDMC 168


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/55 (25%), Positives = 24/55 (43%)
 Frame = -2

Query: 461 DDQYLHRPGVVPSSCKSMLVLSKFLARSTSPSVTDVQSFIHSXWMLYNISSSCRL 297
           DD +       P+S  + L  S     STSP++    +  H+ +  ++I  S  L
Sbjct: 304 DDAFNSVATPTPTSVMTELYPSPVPGHSTSPNLPLTHNIAHNPYPSHSIYPSSNL 358


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -3

Query: 361 QMYRVSSIPXGCYITYRQVVDSQ 293
           Q+YR+ S    CYI    V  SQ
Sbjct: 783 QVYRIGSNGLQCYIDRNVVFSSQ 805


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 561 YLTRCPAVAAVGPTEGLPD 617
           +L+  PA+   GP + LPD
Sbjct: 242 HLSSHPAIVTPGPKQELPD 260


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 561 YLTRCPAVAAVGPTEGLPD 617
           +L+  PA+   GP + LPD
Sbjct: 134 HLSSHPAIVTPGPKQELPD 152


>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = -3

Query: 175 HHLESGPRHQ*EC 137
           HH   GPRH  +C
Sbjct: 351 HHQNFGPRHPPDC 363


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,882
Number of Sequences: 336
Number of extensions: 2978
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)