Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L19
(849 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein. 199 1e-50
BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein. 199 1e-50
AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein pr... 199 1e-50
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 156 8e-38
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 156 8e-38
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 154 3e-37
D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein. 58 4e-08
D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein. 58 4e-08
BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondria... 58 4e-08
BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondria... 58 4e-08
BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein. 58 4e-08
BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein. 58 4e-08
AL592301-15|CAI13946.1| 271|Homo sapiens peptidase (mitochondri... 58 4e-08
AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondri... 58 4e-08
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 50 1e-05
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 48 3e-05
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 48 3e-05
BC004342-1|AAH04342.1| 143|Homo sapiens PMPCA protein protein. 38 0.061
M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear pro... 33 1.7
BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor, argini... 33 1.7
BC032727-1|AAH32727.1| 246|Homo sapiens SFRS11 protein protein. 33 1.7
BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein. 33 1.7
BC009840-1|AAH09840.1| 247|Homo sapiens SFRS11 protein protein. 33 1.7
BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein. 33 1.7
AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor, argini... 33 1.7
AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor, argini... 33 1.7
AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor, argini... 33 1.7
>BC014079-1|AAH14079.2| 480|Homo sapiens PMPCB protein protein.
Length = 480
Score = 199 bits (485), Expect = 1e-50
Identities = 93/131 (70%), Positives = 103/131 (78%)
Frame = +1
Query: 46 RDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNL 225
RDD MPLAH+AIAVE GW D I LMVANTLIG WDRS GGG N +S LA+ GNL
Sbjct: 278 RDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNL 337
Query: 226 CHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKT 405
CHSFQSFNT Y DTGLWG+Y V ES + DML+ + KEWM+LCTSVTE EV RA+NLLKT
Sbjct: 338 CHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKT 397
Query: 406 NMLLQLDGTTP 438
NMLLQLDG+TP
Sbjct: 398 NMLLQLDGSTP 408
Score = 70.9 bits (166), Expect = 5e-12
Identities = 28/43 (65%), Positives = 37/43 (86%)
Frame = +2
Query: 440 VCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYLFD 568
+CEDIGRQMLCYNRRIPI EL+ARI++V +R+VC KY+++
Sbjct: 409 ICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYN 451
Score = 35.9 bits (79), Expect = 0.19
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 552 TNTYLTRCPAVAAVGPTEGLPDYTRIXGGMYW 647
T R PA+AAVGP + LPD+ +I M W
Sbjct: 446 TKYIYNRSPAIAAVGPIKQLPDFKQIRSNMCW 477
>BC010398-1|AAH10398.1| 490|Homo sapiens PMPCB protein protein.
Length = 490
Score = 199 bits (485), Expect = 1e-50
Identities = 93/131 (70%), Positives = 103/131 (78%)
Frame = +1
Query: 46 RDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNL 225
RDD MPLAH+AIAVE GW D I LMVANTLIG WDRS GGG N +S LA+ GNL
Sbjct: 287 RDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNL 346
Query: 226 CHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKT 405
CHSFQSFNT Y DTGLWG+Y V ES + DML+ + KEWM+LCTSVTE EV RA+NLLKT
Sbjct: 347 CHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKT 406
Query: 406 NMLLQLDGTTP 438
NMLLQLDG+TP
Sbjct: 407 NMLLQLDGSTP 417
Score = 70.9 bits (166), Expect = 5e-12
Identities = 28/43 (65%), Positives = 37/43 (86%)
Frame = +2
Query: 440 VCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYLFD 568
+CEDIGRQMLCYNRRIPI EL+ARI++V +R+VC KY+++
Sbjct: 418 ICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYN 460
>AL050216-1|CAB43319.1| 316|Homo sapiens hypothetical protein
protein.
Length = 316
Score = 199 bits (485), Expect = 1e-50
Identities = 93/131 (70%), Positives = 103/131 (78%)
Frame = +1
Query: 46 RDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNL 225
RDD MPLAH+AIAVE GW D I LMVANTLIG WDRS GGG N +S LA+ GNL
Sbjct: 114 RDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCHGNL 173
Query: 226 CHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKT 405
CHSFQSFNT Y DTGLWG+Y V ES + DML+ + KEWM+LCTSVTE EV RA+NLLKT
Sbjct: 174 CHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNLLKT 233
Query: 406 NMLLQLDGTTP 438
NMLLQLDG+TP
Sbjct: 234 NMLLQLDGSTP 244
Score = 70.9 bits (166), Expect = 5e-12
Identities = 28/43 (65%), Positives = 37/43 (86%)
Frame = +2
Query: 440 VCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYLFD 568
+CEDIGRQMLCYNRRIPI EL+ARI++V +R+VC KY+++
Sbjct: 245 ICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYN 287
Score = 35.9 bits (79), Expect = 0.19
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 552 TNTYLTRCPAVAAVGPTEGLPDYTRIXGGMYW 647
T R PA+AAVGP + LPD+ +I M W
Sbjct: 282 TKYIYNRSPAIAAVGPIKQLPDFKQIRSNMCW 313
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 156 bits (379), Expect = 8e-38
Identities = 68/131 (51%), Positives = 93/131 (70%)
Frame = +1
Query: 46 RDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNL 225
RDD++P AHVAIAVEG GW DN+ L VAN +IG +D + GGG + +S LA A L
Sbjct: 278 RDDALPFAHVAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKL 337
Query: 226 CHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKT 405
C SFQ+F+ CY +TGL G +FV + +++DDM++ + +WM+LCTS TE EV R KN+L+
Sbjct: 338 CQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRN 397
Query: 406 NMLLQLDGTTP 438
++ LDGTTP
Sbjct: 398 ALVSHLDGTTP 408
Score = 56.0 bits (129), Expect = 2e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 440 VCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYLFD 568
VCEDIGR +L Y RRIP+ E ++RI V VR++C KY++D
Sbjct: 409 VCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYD 451
Score = 44.4 bits (100), Expect = 5e-04
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 570 RCPAVAAVGPTEGLPDYTRIXGGMYW 647
+CPAVA GP E LPDY RI GM+W
Sbjct: 452 QCPAVAGYGPIEQLPDYNRIRSGMFW 477
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 156 bits (379), Expect = 8e-38
Identities = 68/131 (51%), Positives = 93/131 (70%)
Frame = +1
Query: 46 RDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNL 225
RDD++P AHVAIAVEG GW DN+ L VAN +IG +D + GGG + +S LA A L
Sbjct: 278 RDDALPFAHVAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKL 337
Query: 226 CHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKT 405
C SFQ+F+ CY +TGL G +FV + +++DDM++ + +WM+LCTS TE EV R KN+L+
Sbjct: 338 CQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRN 397
Query: 406 NMLLQLDGTTP 438
++ LDGTTP
Sbjct: 398 ALVSHLDGTTP 408
Score = 56.0 bits (129), Expect = 2e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 440 VCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYLFD 568
VCEDIGR +L Y RRIP+ E ++RI V VR++C KY++D
Sbjct: 409 VCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYD 451
Score = 44.4 bits (100), Expect = 5e-04
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 570 RCPAVAAVGPTEGLPDYTRIXGGMYW 647
+CPAVA GP E LPDY RI GM+W
Sbjct: 452 QCPAVAGYGPIEQLPDYNRIRSGMFW 477
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 154 bits (374), Expect = 3e-37
Identities = 67/131 (51%), Positives = 93/131 (70%)
Frame = +1
Query: 46 RDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNL 225
RDD++P AHVAIAVEG GW D++ L VAN +IG +D + GGG + +S LA A L
Sbjct: 278 RDDALPFAHVAIAVEGPGWASPDSVALQVANAIIGHYDCTYGGGVHLSSPLASGAVANKL 337
Query: 226 CHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKT 405
C SFQ+F+ CY +TGL G +FV + +++DDM++ + +WM+LCTS TE EV R KN+L+
Sbjct: 338 CQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGKNILRN 397
Query: 406 NMLLQLDGTTP 438
++ LDGTTP
Sbjct: 398 ALVSHLDGTTP 408
Score = 56.0 bits (129), Expect = 2e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 440 VCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYLFD 568
VCEDIGR +L Y RRIP+ E ++RI V VR++C KY++D
Sbjct: 409 VCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYD 451
Score = 44.4 bits (100), Expect = 5e-04
Identities = 17/26 (65%), Positives = 19/26 (73%)
Frame = +3
Query: 570 RCPAVAAVGPTEGLPDYTRIXGGMYW 647
+CPAVA GP E LPDY RI GM+W
Sbjct: 452 QCPAVAGYGPIEQLPDYNRIRSGMFW 477
>D50913-1|BAA09472.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 58.0 bits (134), Expect = 4e-08
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
L H+ + +E + + D IP V N ++G GG + +V N H +
Sbjct: 320 LTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYN 379
Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
S++ Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + ++
Sbjct: 380 ATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLM 439
Query: 415 LQLD 426
+ L+
Sbjct: 440 MNLE 443
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 419 NLMEPLLVCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYL 562
NL ++ ED+GRQ+L R HEL I +V +V+ V K L
Sbjct: 441 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 488
>D21064-1|BAA04643.1| 528|Homo sapiens KIAA0123 protein.
Length = 528
Score = 58.0 bits (134), Expect = 4e-08
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
L H+ + +E + + D IP V N ++G GG + +V N H +
Sbjct: 320 LTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYN 379
Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
S++ Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + ++
Sbjct: 380 ATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLM 439
Query: 415 LQLD 426
+ L+
Sbjct: 440 MNLE 443
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 419 NLMEPLLVCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYL 562
NL ++ ED+GRQ+L R HEL I +V +V+ V K L
Sbjct: 441 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 488
>BC132724-1|AAI32725.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 58.0 bits (134), Expect = 4e-08
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
L H+ + +E + + D IP V N ++G GG + +V N H +
Sbjct: 317 LTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYN 376
Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
S++ Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + ++
Sbjct: 377 ATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLM 436
Query: 415 LQLD 426
+ L+
Sbjct: 437 MNLE 440
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 419 NLMEPLLVCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYL 562
NL ++ ED+GRQ+L R HEL I +V +V+ V K L
Sbjct: 438 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 485
>BC111399-1|AAI11400.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 58.0 bits (134), Expect = 4e-08
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
L H+ + +E + + D IP V N ++G GG + +V N H +
Sbjct: 317 LTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYN 376
Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
S++ Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + ++
Sbjct: 377 ATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLM 436
Query: 415 LQLD 426
+ L+
Sbjct: 437 MNLE 440
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 419 NLMEPLLVCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYL 562
NL ++ ED+GRQ+L R HEL I +V +V+ V K L
Sbjct: 438 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 485
>BC033103-1|AAH33103.2| 526|Homo sapiens PMPCA protein protein.
Length = 526
Score = 58.0 bits (134), Expect = 4e-08
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
L H+ + +E + + D IP V N ++G GG + +V N H +
Sbjct: 318 LTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYN 377
Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
S++ Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + ++
Sbjct: 378 ATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLM 437
Query: 415 LQLD 426
+ L+
Sbjct: 438 MNLE 441
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 419 NLMEPLLVCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYL 562
NL ++ ED+GRQ+L R HEL I +V +V+ V K L
Sbjct: 439 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 486
>BC022949-1|AAH22949.1| 521|Homo sapiens PMPCA protein protein.
Length = 521
Score = 58.0 bits (134), Expect = 4e-08
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
L H+ + +E + + D IP V N ++G GG + +V N H +
Sbjct: 313 LTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYN 372
Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
S++ Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + ++
Sbjct: 373 ATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLM 432
Query: 415 LQLD 426
+ L+
Sbjct: 433 MNLE 436
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 419 NLMEPLLVCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYL 562
NL ++ ED+GRQ+L R HEL I +V +V+ V K L
Sbjct: 434 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 481
>AL592301-15|CAI13946.1| 271|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 271
Score = 58.0 bits (134), Expect = 4e-08
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
L H+ + +E + + D IP V N ++G GG + +V N H +
Sbjct: 25 LTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYN 84
Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
S++ Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + ++
Sbjct: 85 ATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLM 144
Query: 415 LQLD 426
+ L+
Sbjct: 145 MNLE 148
>AL592301-14|CAI13945.1| 525|Homo sapiens peptidase (mitochondrial
processing) alpha protein.
Length = 525
Score = 58.0 bits (134), Expect = 4e-08
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 3/124 (2%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
L H+ + +E + + D IP V N ++G GG + +V N H +
Sbjct: 317 LTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKGMFSRLYLNVLNRHHWMYN 376
Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
S++ Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + ++
Sbjct: 377 ATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLM 436
Query: 415 LQLD 426
+ L+
Sbjct: 437 MNLE 440
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 419 NLMEPLLVCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYL 562
NL ++ ED+GRQ+L R HEL I +V +V+ V K L
Sbjct: 438 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 485
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 49.6 bits (113), Expect = 1e-05
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARA-ASVGNLCHSFQ 240
L H A E A A+ V ++GA + G SN S+L +A A
Sbjct: 266 LVHAAFVAESAVAGSAEANAFSVLQHVLGAGPHVKRG-SNTTSHLHQAVAKATQQPFDVS 324
Query: 241 SFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCT-SVTEGEVERAKNLLKTNMLL 417
+FN Y D+GL+GIY ++++ D++ + ++ +++ +V+ AKN LK L+
Sbjct: 325 AFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKRIAQGNLSNTDVQAAKNKLKAGYLM 384
Query: 418 QLDGT 432
++ +
Sbjct: 385 SVESS 389
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 48.4 bits (110), Expect = 3e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARA-ASVGNLCHSFQ 240
L H A E A A+ V ++GA + G SN S+L +A A
Sbjct: 266 LVHAAFVAESAVAGSAEANAFSVLQHVLGAGPHVKRG-SNTTSHLHQAVAKATQQPFDVS 324
Query: 241 SFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCT-SVTEGEVERAKNLLKTNMLL 417
+FN Y D+GL+GIY ++++ D++ + + +++ +V+ AKN LK L+
Sbjct: 325 AFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLM 384
Query: 418 QLDGT 432
++ +
Sbjct: 385 SVESS 389
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 48.4 bits (110), Expect = 3e-05
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 2/125 (1%)
Frame = +1
Query: 64 LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARA-ASVGNLCHSFQ 240
L H A E A A+ V ++GA + G SN S+L +A A
Sbjct: 266 LVHAAFVAESAVAGSAEANAFSVLQHVLGAGPHVKRG-SNTTSHLHQAVAKATQQPFDVS 324
Query: 241 SFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCT-SVTEGEVERAKNLLKTNMLL 417
+FN Y D+GL+GIY ++++ D++ + + +++ +V+ AKN LK L+
Sbjct: 325 AFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLKAGYLM 384
Query: 418 QLDGT 432
++ +
Sbjct: 385 SVESS 389
>BC004342-1|AAH04342.1| 143|Homo sapiens PMPCA protein protein.
Length = 143
Score = 37.5 bits (83), Expect = 0.061
Identities = 20/57 (35%), Positives = 36/57 (63%)
Frame = +1
Query: 256 YKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNMLLQLD 426
Y+DTGL I+ A+ Q+ +M+ I KE++ + +V E+ERAK L + +++ L+
Sbjct: 2 YEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKTQLTSMLMMNLE 58
Score = 30.3 bits (65), Expect = 9.2
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 419 NLMEPLLVCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYL 562
NL ++ ED+GRQ+L R HEL I +V +V+ V K L
Sbjct: 56 NLESRPVIFEDVGRQVLATRSRKLPHELCTLIRNVKPEDVKRVASKML 103
>M74002-1|AAA35554.1| 484|Homo sapiens arginine-rich nuclear
protein protein.
Length = 484
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
>BC040436-1|AAH40436.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
>BC032727-1|AAH32727.1| 246|Homo sapiens SFRS11 protein protein.
Length = 246
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
>BC017359-1|AAH17359.1| 394|Homo sapiens SFRS11 protein protein.
Length = 394
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
>BC009840-1|AAH09840.1| 247|Homo sapiens SFRS11 protein protein.
Length = 247
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
>BC002784-1|AAH02784.1| 321|Homo sapiens SFRS11 protein protein.
Length = 321
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
>AL353771-6|CAI22335.1| 484|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 484
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
>AL353771-5|CAI22334.1| 483|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 483
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
>AL353771-4|CAI22333.1| 389|Homo sapiens splicing factor,
arginine/serine-rich 11 protein.
Length = 389
Score = 32.7 bits (71), Expect = 1.7
Identities = 12/23 (52%), Positives = 18/23 (78%)
Frame = -3
Query: 505 IKFMDGDASVVAEHLTTNIFTDQ 437
+KF D D++VVA+HLT +F D+
Sbjct: 81 VKFHDPDSAVVAQHLTNTVFVDR 103
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,938,581
Number of Sequences: 237096
Number of extensions: 1952428
Number of successful extensions: 4173
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 4012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4165
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10761200974
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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