Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L19
         (849 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68270-1|CAA92566.2|  458|Caenorhabditis elegans Hypothetical pr...   128   5e-30
U13644-8|AAB52679.1|  471|Caenorhabditis elegans Hypothetical pr...   101   5e-22
AC025726-19|AAK73925.1|  477|Caenorhabditis elegans Mitochondria...    50   2e-06
Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical pr...    36   0.036
U29082-7|AAA68404.3|  319|Caenorhabditis elegans Hypothetical pr...    28   9.6  

>Z68270-1|CAA92566.2|  458|Caenorhabditis elegans Hypothetical
           protein ZC410.2 protein.
          Length = 458

 Score =  128 bits (309), Expect = 5e-30
 Identities = 60/127 (47%), Positives = 84/127 (66%)
 Frame = +1

Query: 58  MPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCHSF 237
           +P+ + A+ VEG  WT  DN+ LMVANTL+G +DR +G G N  + LA   S       F
Sbjct: 261 LPMLYGAMVVEGVSWTHEDNLALMVANTLMGEYDRMRGFGVNAPTRLAEKLSQDAGIEVF 320

Query: 238 QSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNMLL 417
           QSFNTCYK+TGL G YFVA    +D+++ ++ ++W+ L  ++ E  V+RAK  L TN+LL
Sbjct: 321 QSFNTCYKETGLVGTYFVAAPESIDNLIDSVLQQWVWLANNIDEAAVDRAKRSLHTNLLL 380

Query: 418 QLDGTTP 438
            LDG+TP
Sbjct: 381 MLDGSTP 387



 Score = 64.9 bits (151), Expect = 7e-11
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = +2

Query: 440 VCEDIGRQMLCYNRRIPIHELDARIESVTVXNVRDVCYKYLFD 568
           VCEDIGRQ+LCY RRIP  EL ARIES+TV  +RDVC +   +
Sbjct: 388 VCEDIGRQLLCYGRRIPTPELHARIESITVQQLRDVCRRVFLE 430


>U13644-8|AAB52679.1|  471|Caenorhabditis elegans Hypothetical
           protein F56D2.1 protein.
          Length = 471

 Score =  101 bits (243), Expect = 5e-22
 Identities = 52/133 (39%), Positives = 76/133 (57%), Gaps = 3/133 (2%)
 Frame = +1

Query: 46  RDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNL 225
           R+D++P  + A AVEG G+   D + L +AN  IG WD +       AS L +     + 
Sbjct: 266 RNDNVPHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVTHATSRTAASRLVQKIGHDHG 325

Query: 226 CHSFQSFNTCYKDTGLWGIYFVAESLQLDD---MLYNIXKEWMKLCTSVTEGEVERAKNL 396
            H+ Q FN  YKDTGL+GIYFVA++  L+D   ++ ++  EW  L ++ TE EV  AKN 
Sbjct: 326 VHNLQHFNINYKDTGLFGIYFVADAHDLNDTSGIMKSVAHEWKHLASAATEEEVAMAKNQ 385

Query: 397 LKTNMLLQLDGTT 435
            +TN+   L+  T
Sbjct: 386 FRTNLYQNLETNT 398


>AC025726-19|AAK73925.1|  477|Caenorhabditis elegans Mitochondrial
           processing peptidasealpha protein 1 protein.
          Length = 477

 Score = 50.0 bits (114), Expect = 2e-06
 Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 3/124 (2%)
 Frame = +1

Query: 64  LAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNLCH---S 234
           L+HV + +EG  + D D +   V  +L+G       GG     Y      + N  H   S
Sbjct: 274 LSHVVLGLEGCSYKDEDFVAFCVLQSLLGGGGAFSAGGPGKGMYARMYTELMNRHHWIYS 333

Query: 235 FQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKNLLKTNML 414
             + N  Y D+G++ +   +    ++D L  +  + ++L   V   E+ RA+  L+++++
Sbjct: 334 AIAHNHSYSDSGVFTVTASSPPENINDALILLVHQILQLQQGVEPTELARARTQLRSHLM 393

Query: 415 LQLD 426
           + L+
Sbjct: 394 MNLE 397


>Z72514-2|CAA96675.2|  422|Caenorhabditis elegans Hypothetical
           protein T10B10.2 protein.
          Length = 422

 Score = 35.9 bits (79), Expect = 0.036
 Identities = 32/116 (27%), Positives = 47/116 (40%)
 Frame = +1

Query: 46  RDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSNNASYLARAASVGNL 225
           RD     AHV +A EGA   +     L     L+ A   S     N  +    A +VG  
Sbjct: 243 RDADSKYAHVIVAGEGAAGNNTK--ALATQAVLLTALGNSSPVKFNTGTTGVIAKAVGQN 300

Query: 226 CHSFQSFNTCYKDTGLWGIYFVAESLQLDDMLYNIXKEWMKLCTSVTEGEVERAKN 393
             S  +F   + D+GL G+Y V E  Q +  + N+      L  +  E   ++A N
Sbjct: 301 -GSASAFQAVHADSGLAGVYLVVEGSQANQAVSNVVGALKSLKVADIEAVKKQAFN 355


>U29082-7|AAA68404.3|  319|Caenorhabditis elegans Hypothetical
           protein C14F5.4 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
 Frame = +1

Query: 40  FSRDDSMPLAHVAIAVEGAGWTDADNIPLMVANTLIGAWDRSQGGGSN-NASYLARAASV 216
           F++  S PLA   + +      +A NIP+M  N L      +   G+N   S LA A ++
Sbjct: 162 FAKKQSSPLAQRLVPLGAVAVANAINIPMMRQNELKEGMTVTDADGNNVGVSRLAAAKAI 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,086,652
Number of Sequences: 27780
Number of extensions: 286663
Number of successful extensions: 732
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 731
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)