Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L16
         (866 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          23   4.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      23   4.8  
AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       22   6.4  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    22   6.4  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                22   6.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   8.4  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 384 PKLLFNTGILTTGTCAILFGLLD 452
           P   FN+ +L     A++FG LD
Sbjct: 167 PYFFFNSEVLQKANHALIFGKLD 189


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 22.6 bits (46), Expect = 4.8
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +3

Query: 384 PKLLFNTGILTTGTCAILFGLLD 452
           P   FN+ +L     A++FG LD
Sbjct: 167 PYFFFNSEVLQKANHALIFGKLD 189


>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 462 GHVPFITLSFVIRIVEAMGNAAFL 533
           GH+  I    V+ I+ A+GN   L
Sbjct: 36  GHIVSIVFYSVLMIISAIGNTTVL 59


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 354 IYGAHLNRIGPKLLFNTGILTTGTCAI 434
           I+G HLNR+G ++  +T    T  C I
Sbjct: 317 IFGHHLNRLGREI--STYFTFTRPCGI 341


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 494 YKAERYKGNMAXYSI*QTEQYS 429
           YKA  YKG      I QTE+YS
Sbjct: 82  YKA-LYKGEQVAAKIIQTEKYS 102


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 8.4
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +2

Query: 320 GLRVSG-VHCEPHLWSPSQQDRA 385
           G+R++   +  P  WSP+  DRA
Sbjct: 506 GIRLAAPFNASPTTWSPADLDRA 528


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,386
Number of Sequences: 438
Number of extensions: 4795
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28038087
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)