Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L15
(886 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 231 2e-59
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 212 1e-53
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 194 2e-48
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 168 1e-40
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 163 4e-39
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 139 8e-32
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 137 4e-31
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 135 2e-30
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 132 2e-29
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 130 6e-29
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 111 3e-23
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 98 3e-19
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 91 5e-17
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 87 4e-16
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 81 3e-14
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 81 4e-14
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 71 3e-11
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 58 4e-07
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 57 7e-07
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 57 7e-07
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 55 2e-06
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 54 6e-06
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 53 1e-05
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 52 3e-05
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 48 4e-04
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 46 0.001
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 45 0.002
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 45 0.002
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 44 0.004
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 44 0.005
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 42 0.028
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 40 0.064
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 40 0.11
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 37 0.59
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 37 0.79
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 5.5
UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol alpha-mannosy... 34 5.5
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 9.7
UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2; ... 33 9.7
UniRef50_P58107 Cluster: Epiplakin; n=11; cellular organisms|Rep... 33 9.7
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 231 bits (565), Expect = 2e-59
Identities = 108/146 (73%), Positives = 130/146 (89%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
+GTKIAS+GLKGRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDK
Sbjct: 53 QGTKIASDGLKGRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDK 112
Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
LR MVKKWQTLIE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM
Sbjct: 113 LRSMVKKWQTLIECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMT 172
Query: 584 EIITRDVTNSELREVVNKLIPDSIAQ 661
II R++T+++L+ VV KL+PDSIA+
Sbjct: 173 AIIKREITSTDLKGVVEKLLPDSIAK 198
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQG + ++G+ F
Sbjct: 21 VVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLKGRVF 67
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 212 bits (517), Expect = 1e-53
Identities = 105/151 (69%), Positives = 124/151 (82%)
Frame = +2
Query: 209 LSTVPRGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 388
L T +GTKIAS+GLKGRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMD
Sbjct: 48 LVTRTQGTKIASDGLKGRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMD 104
Query: 389 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAI 568
LT DK+ MVKKWQT+IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR I
Sbjct: 105 LTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQI 164
Query: 569 RKKMCEIITRDVTNSELREVVNKLIPDSIAQ 661
RKKM EI+TR+V ++L+EVVNKLIPDSI +
Sbjct: 165 RKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 195
Score = 64.1 bits (149), Expect = 5e-09
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
+VDPF++KDWYDVKAP+MF+ R +G TLV RTQG + ++G+ F
Sbjct: 21 VVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGRVF 67
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 656
Score = 194 bits (473), Expect = 2e-48
Identities = 95/146 (65%), Positives = 116/146 (79%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
+GTKIASEGLK RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDK
Sbjct: 447 QGTKIASEGLKHRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDK 504
Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
LR +V+KWQTLIEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM
Sbjct: 505 LRSLVRKWQTLIEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMR 564
Query: 584 EIITRDVTNSELREVVNKLIPDSIAQ 661
EI+T T+ +L+E+V K IP+SI +
Sbjct: 565 EIMTNMATSCDLKELVKKFIPESIGR 590
Score = 58.0 bits (134), Expect = 3e-07
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +1
Query: 133 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 234
DPF +KDWYD+KAPS+F R VG TLV+RTQG +
Sbjct: 417 DPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTK 450
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 168 bits (409), Expect = 1e-40
Identities = 83/144 (57%), Positives = 112/144 (77%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
+GTK+AS+GLKGRV+EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DK
Sbjct: 51 QGTKLASDGLKGRVYEVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDK 108
Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
LR ++ KW TLIE +DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM
Sbjct: 109 LRSLIHKWSTLIECFVDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMV 168
Query: 584 EIITRDVTNSELREVVNKLIPDSI 655
+I+T V++++L+ VV+ LI S+
Sbjct: 169 DILTETVSSNDLKTVVDYLIGVSL 192
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 4/50 (8%)
Frame = +1
Query: 130 VDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGNENCFGRIEGKSF 267
VDPFTRK+WY V+AP+ F K +VG T VNRTQG + ++G+ +
Sbjct: 16 VDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 163 bits (397), Expect = 4e-39
Identities = 79/145 (54%), Positives = 106/145 (73%)
Frame = +2
Query: 227 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 406
G K A++ LKGR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKL
Sbjct: 53 GMKNANDALKGRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKL 110
Query: 407 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 586
R +V+KWQ+LIEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM E
Sbjct: 111 RSLVRKWQSLIEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTE 170
Query: 587 IITRDVTNSELREVVNKLIPDSIAQ 661
II R+ + L+++ NKLIP+ I +
Sbjct: 171 IIQREASTCTLQQLTNKLIPEVIGR 195
Score = 58.0 bits (134), Expect = 3e-07
Identities = 24/45 (53%), Positives = 32/45 (71%)
Frame = +1
Query: 133 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
DPF RKDWY +KAP+ F+ R VG TLVNR+ G +N ++G+ F
Sbjct: 22 DPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALKGRIF 66
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 139 bits (337), Expect = 8e-32
Identities = 71/138 (51%), Positives = 97/138 (70%)
Frame = +2
Query: 227 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 406
GT+IASE LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKL
Sbjct: 55 GTRIASEQLKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKL 112
Query: 407 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 586
R +VKKW TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M
Sbjct: 113 RSIVKKWCTLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNN 172
Query: 587 IITRDVTNSELREVVNKL 640
+IT++ + EL + V+ L
Sbjct: 173 LITKEAASRELTQFVDYL 190
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 261
I +PF++K+WY+VK P F +R VG +VN+T G +++G+
Sbjct: 22 IAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQLKGR 66
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 137 bits (331), Expect = 4e-31
Identities = 69/148 (46%), Positives = 97/148 (65%), Gaps = 3/148 (2%)
Frame = +2
Query: 209 LSTVPRGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 388
L T G +IASE +KGRV E +LADL+ D ++++RK +L+ + V GRN +F+G+D
Sbjct: 49 LVTKSSGNRIASEEIKGRVVESTLADLK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLD 107
Query: 389 LTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQV 559
+T D+L M++KWQTLIEA +D KT DGY++RVF + FT K S S TCYA+ +QV
Sbjct: 108 ITRDRLCSMIRKWQTLIEARVDCKTNDGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQV 167
Query: 560 RAIRKKMCEIITRDVTNSELREVVNKLI 643
RAIR+K+ IT + + E LI
Sbjct: 168 RAIRRKINTFITNEAAKLGIAEFSKNLI 195
Score = 49.2 bits (112), Expect = 1e-04
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +1
Query: 130 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 273
+DP +RK+WYD +AP FS + G TLV ++ GN I+G+ S
Sbjct: 23 IDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVES 70
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 135 bits (326), Expect = 2e-30
Identities = 65/115 (56%), Positives = 82/115 (71%)
Frame = +2
Query: 317 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 496
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 497 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAQ 661
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI Q
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQ 120
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 132 bits (318), Expect = 2e-29
Identities = 62/145 (42%), Positives = 98/145 (67%)
Frame = +2
Query: 227 GTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKL 406
GT +A+E +KGRV E SLADLQ +D + ++RK +LI + V+G +F+G+D T DK+
Sbjct: 51 GTVVATEAIKGRVVEASLADLQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKI 109
Query: 407 RWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCE 586
M+KK QTLIE ++ ++ DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ E
Sbjct: 110 FGMIKKRQTLIETQVEARSQDGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVE 169
Query: 587 IITRDVTNSELREVVNKLIPDSIAQ 661
I+ ++V+ + +++ +S+A+
Sbjct: 170 IVLKEVSKKSITQLLGFFNQESLAK 194
Score = 36.3 bits (80), Expect = 1.0
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +1
Query: 130 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGK 261
+DP RK+W+++ AP F+ G T +N++ G I+G+
Sbjct: 19 IDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGR 62
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 130 bits (313), Expect = 6e-29
Identities = 56/139 (40%), Positives = 93/139 (66%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
+GT+IA++ L+GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK
Sbjct: 53 QGTRIAADVLRGRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDK 112
Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
+ +++KW T +E ++VKT DGY +R+F + FT + Q + CYA+ V+ +R ++
Sbjct: 113 MANLLRKWCTTMETTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRIT 172
Query: 584 EIITRDVTNSELREVVNKL 640
++I R ++ +++E V+ L
Sbjct: 173 KMIKRRLSKVQIKEAVSLL 191
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/47 (40%), Positives = 27/47 (57%)
Frame = +1
Query: 133 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSFRS 273
+ RK+WYDV AP+ F KRQ T+ N+TQG + G+ F +
Sbjct: 23 ETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLRGRVFEA 69
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 111 bits (266), Expect = 3e-23
Identities = 66/145 (45%), Positives = 92/145 (63%), Gaps = 1/145 (0%)
Frame = +2
Query: 230 TKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLR 409
TK+ S GL G VFE SLA LQ D RKF+LI E ++G+N L N +GMDLT DK
Sbjct: 40 TKMVSVGLNGLVFEASLASLQNDKVV---VRKFKLITEDMRGKNGLTNSYGMDLTWDKRC 96
Query: 410 WMVKKWQTLIEANIDVKTTDGYVLRVFCIGF-TNKDSLSQRKTCYAQHTQVRAIRKKMCE 586
V KWQ ++EA+ DVKT D Y+L +FC+G+ TN + R+ AQ+ QV I +
Sbjct: 97 NKVIKWQ-MVEAHADVKTADYYLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQ 155
Query: 587 IITRDVTNSELREVVNKLIPDSIAQ 661
I+ D ++L+EV+NKL+PD++ +
Sbjct: 156 IM--DQRRTDLKEVLNKLVPDNVGK 178
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 97.9 bits (233), Expect = 3e-19
Identities = 48/135 (35%), Positives = 81/135 (60%)
Frame = +2
Query: 257 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 436
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 437 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 616
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 617 LREVVNKLIPDSIAQ 661
+++++ KL +++ +
Sbjct: 133 VQKIMKKLANETVGK 147
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 90.6 bits (215), Expect = 5e-17
Identities = 55/176 (31%), Positives = 86/176 (48%)
Frame = +2
Query: 215 TVPRGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLT 394
T G ++A++ + RV+EV+L DL + KF L + V L NFHGMD+T
Sbjct: 47 TKTAGLRVATDVINHRVYEVNLGDLNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDIT 106
Query: 395 TDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK 574
K + +K I+ +D+ TTDGY+LRVF I FT++ +RK C+ + +R +R
Sbjct: 107 RHKYGSLFRKGCDCIDVFMDIPTTDGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRA 166
Query: 575 KMCEIITRDVTNSELREVVNKLIPDSIAQGHREXLXWASTLCAMFAXER*KC*KXP 742
+ E + ++ + +V KL + E L T+C R K K P
Sbjct: 167 GIYETLHNELGKVSIPVLVTKLSNFEVNAKLTEALQ-KITMCRDVMIRRVKVVKRP 221
Score = 39.9 bits (89), Expect = 0.084
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 133 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQG 228
DP+ +K+WY V AP+ F R +G T V +T G
Sbjct: 20 DPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAG 51
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 87.4 bits (207), Expect = 4e-16
Identities = 41/133 (30%), Positives = 76/133 (57%)
Frame = +2
Query: 242 SEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVK 421
+ + ++++VSLAD+ E S F + + FHG+ LT DK+ ++K
Sbjct: 54 NSSVDNKIYQVSLADILGKE--EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIK 111
Query: 422 KWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 601
KW TLIE ++ KT DGY L++F I + K + KT Y +Q RA+R+++ +II ++
Sbjct: 112 KWHTLIEVEVNFKTKDGYFLKLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKE 171
Query: 602 VTNSELREVVNKL 640
N ++++ ++++
Sbjct: 172 GINMDIKDFIHRI 184
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 81.4 bits (192), Expect = 3e-14
Identities = 45/141 (31%), Positives = 77/141 (54%)
Frame = +2
Query: 233 KIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRW 412
++ + + RV+E+S AD+ D +R IA G V F GM LT DKL
Sbjct: 52 RVPMDYVNNRVWELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDS 108
Query: 413 MVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEII 592
+++K++T+I+A++D KT DG++LR+F IGFT K + S + YA + R +R M + +
Sbjct: 109 IMRKYRTMIDASVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKAL 168
Query: 593 TRDVTNSELREVVNKLIPDSI 655
T + + ++ + + I
Sbjct: 169 TDACEANGVEQLCKDFVDEKI 189
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 81.0 bits (191), Expect = 4e-14
Identities = 48/87 (55%), Positives = 60/87 (68%)
Frame = +2
Query: 209 LSTVPRGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 388
L T +GTKIAS+G RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+D
Sbjct: 48 LVTRTQGTKIASDG---RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVD 101
Query: 389 LTTDKLRWMVKKWQTLIEANIDVKTTD 469
LT+DK+ ++K I +V+T D
Sbjct: 102 LTSDKITSQIRKKMMEIMTR-EVQTND 127
Score = 59.3 bits (137), Expect = 1e-07
Identities = 23/36 (63%), Positives = 30/36 (83%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 234
+VDPF++KDWYDV AP+MF+ R +G TLV RTQG +
Sbjct: 21 VVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTK 56
Score = 48.8 bits (111), Expect = 2e-04
Identities = 22/32 (68%), Positives = 28/32 (87%)
Frame = +2
Query: 566 IRKKMCEIITRDVTNSELREVVNKLIPDSIAQ 661
IRKKM EI+TR+V ++L+EVVNKLIPDSI +
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGK 142
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 71.3 bits (167), Expect = 3e-11
Identities = 39/64 (60%), Positives = 46/64 (71%)
Frame = +2
Query: 209 LSTVPRGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMD 388
L T +GTKIAS+GLKG VFE+SLADLQ D E +FRKF+LI E VQG+ L NF M
Sbjct: 48 LVTRTQGTKIASDGLKGGVFEMSLADLQND---EVAFRKFKLITEDVQGKRCLINFRSMG 104
Query: 389 LTTD 400
L+ D
Sbjct: 105 LSCD 108
Score = 54.4 bits (125), Expect = 4e-06
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +1
Query: 130 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
VD ++KDWYD+KAP+MF+ R +G TLV RTQG + ++G F
Sbjct: 22 VDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVF 67
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 57.6 bits (133), Expect = 4e-07
Identities = 45/147 (30%), Positives = 77/147 (52%), Gaps = 2/147 (1%)
Frame = +2
Query: 209 LSTVPRGTKIASEG--LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHG 382
L+ V GT +A + L GR E ++ +L D ++ K L V G + G
Sbjct: 27 LNRVIVGTTMAGDPSLLVGRNVETTVGELT--NDMTKNNTKVILRVNNVVGDIATTDLMG 84
Query: 383 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 562
+LTTD +R +VK+ + I+AN+DV+T DG+V+RV FT K A+ +Q++
Sbjct: 85 HELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCFTIK---------RARSSQMQ 135
Query: 563 AIRKKMCEIITRDVTNSELREVVNKLI 643
AIR+ M +I+ + + ++ + + I
Sbjct: 136 AIREMMVDIVKKRASETDFETFMQEAI 162
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 56.8 bits (131), Expect = 7e-07
Identities = 39/134 (29%), Positives = 68/134 (50%)
Frame = +2
Query: 257 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 436
GRV E +L D+ D + FR+ E + G + +F G +LT D +R +VK+ +
Sbjct: 44 GRVMESTLGDVTGDWTKQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSK 101
Query: 437 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 616
I+AN+ V T DG+ +RV I T K A+ +Q+ +IR+ M ++ +
Sbjct: 102 IDANVVVTTKDGFKVRVKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELG 152
Query: 617 LREVVNKLIPDSIA 658
E +N+++ +A
Sbjct: 153 FTEFINEVVTGKVA 166
Score = 33.9 bits (74), Expect = 5.5
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 130 VDPFTRKDWYDVKAPSMFSKRQVGTTLVN 216
VD F K+WY V AP+ F++ +G TL +
Sbjct: 9 VDAFRAKNWYQVIAPAEFNRANIGETLAD 37
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 56.8 bits (131), Expect = 7e-07
Identities = 38/133 (28%), Positives = 67/133 (50%)
Frame = +2
Query: 260 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 439
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 440 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 619
A +VKT DG V+R+ +G T + +K+ A+RKKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 620 REVVNKLIPDSIA 658
+ + +++ ++A
Sbjct: 164 GQFLKEILEGTLA 176
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 55.2 bits (127), Expect = 2e-06
Identities = 41/133 (30%), Positives = 64/133 (48%)
Frame = +2
Query: 245 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 424
E + GRV E +L D+ D FR+ V+G F G L D +R +V++
Sbjct: 34 EKVIGRVLETTLGDVLDDITKHHIKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRR 91
Query: 425 WQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDV 604
+ I+ IDV T DGY +RV + FT T A+ +Q RAIRK+M ++I +
Sbjct: 92 GTSRIDGVIDVVTKDGYKVRVAGLAFT---------TRRAKTSQQRAIRKEMFKVIEENA 142
Query: 605 TNSELREVVNKLI 643
+ E + + +
Sbjct: 143 KECDFDEFIRRCL 155
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 53.6 bits (123), Expect = 6e-06
Identities = 41/131 (31%), Positives = 63/131 (48%)
Frame = +2
Query: 257 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 436
GRV E +L DL + F++ VQG N F G D+TTD +R M+++ ++
Sbjct: 49 GRVAESTLYDLSGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSR 106
Query: 437 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 616
I+ +V+T+DGY +RV + ++ S KT IRKK+ E +T
Sbjct: 107 IDMIFNVETSDGYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMT 157
Query: 617 LREVVNKLIPD 649
E V +I D
Sbjct: 158 FSEYVKYIISD 168
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 52.8 bits (121), Expect = 1e-05
Identities = 39/131 (29%), Positives = 63/131 (48%)
Frame = +2
Query: 251 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 430
L GRV E +L D+ D F+++ V+G F G +L D +R + ++
Sbjct: 40 LIGRVMETTLFDITGDYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKS 97
Query: 431 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 610
+ + +V T DGY LRV + FT R+ C + +Q AIRK M EI+ +
Sbjct: 98 SKVTGIFNVWTKDGYGLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARE 148
Query: 611 SELREVVNKLI 643
S L E++ ++
Sbjct: 149 STLDELIQLMV 159
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 51.6 bits (118), Expect = 3e-05
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 257 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 436
GR E +LA+L D + +++K V G N F +LT + L + ++ +
Sbjct: 46 GRTVETTLAELTNDYSNQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSK 105
Query: 437 IEANIDVKTTDGYVLRVFCIGFT-NKDSLSQRKTCYAQHTQV 559
IE +DV T DGY LRV + FT + SQ++ A Q+
Sbjct: 106 IEDIVDVTTADGYKLRVKSVVFTVRRCKTSQKRAIRAIMRQI 147
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 47.6 bits (108), Expect = 4e-04
Identities = 29/95 (30%), Positives = 49/95 (51%)
Frame = +2
Query: 251 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 430
L GR+ E+SL DL + + F++ + V G N F G D T + L+ V++ +
Sbjct: 49 LIGRISEISLRDLTNEHSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRR 106
Query: 431 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKT 535
+ I A ++V+T DG+ +RV + T + KT
Sbjct: 107 SKINAIVEVRTKDGFKVRVKALVLTAVRARDHHKT 141
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 46.4 bits (105), Expect = 0.001
Identities = 35/135 (25%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Frame = +2
Query: 257 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 436
GR E +L DL D F+++ +G + F G +L+ D +R +V++ +
Sbjct: 50 GRKVETTLYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSK 107
Query: 437 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNS 613
I +D+ T DG+ LRV + T Y H Q IRK M +++ +
Sbjct: 108 INKVVDITTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGK 157
Query: 614 ELREVVNKLIPDSIA 658
E V ++I ++A
Sbjct: 158 TFDEFVQEMIFGNLA 172
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 45.2 bits (102), Expect = 0.002
Identities = 34/134 (25%), Positives = 61/134 (45%)
Frame = +2
Query: 257 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 436
GR +L +L D+ A + F++ V F +LT D LR +V++ +
Sbjct: 42 GRTITTTLGELTGDSGANNTKLTFKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASK 99
Query: 437 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 616
+EA+I V TTD Y +RV + T K A +Q +AIR+ M + + +
Sbjct: 100 VEASITVLTTDDYRIRVQPVALTTKK---------ADRSQEKAIRRVMIDKVHAAAEDRT 150
Query: 617 LREVVNKLIPDSIA 658
V+ ++ +++
Sbjct: 151 FESFVDAIVEGNLS 164
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 45.2 bits (102), Expect = 0.002
Identities = 31/129 (24%), Positives = 60/129 (46%)
Frame = +2
Query: 257 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 436
GR E +L +L D + F++ V + F +LT D LR +V++ +
Sbjct: 42 GRTIETTLGELTNDASENNTKLTFKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSK 99
Query: 437 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 616
+EA I V TTD Y +++ + T K A +Q +AIR+ M +++ +
Sbjct: 100 VEAYITVLTTDDYRVQIQPVAVTTKK---------ADASQEKAIRRTMIDLVRETAEDHT 150
Query: 617 LREVVNKLI 643
++++ ++
Sbjct: 151 FEQLIDSVV 159
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 44.4 bits (100), Expect = 0.004
Identities = 26/91 (28%), Positives = 50/91 (54%)
Frame = +2
Query: 239 ASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMV 418
+ E + GR++E++ + D +FR ++E V G++ L F G T+ +R +
Sbjct: 50 SDEHIIGRIYEMTQQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQI 107
Query: 419 KKWQTLIEANIDVKTTDGYVLRVFCIGFTNK 511
++++ I+ IDV T DGY++R+ + T K
Sbjct: 108 RRYRGKIDDVIDVVTEDGYLVRIKPLIITQK 138
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 44.0 bits (99), Expect = 0.005
Identities = 25/93 (26%), Positives = 49/93 (52%)
Frame = +2
Query: 254 KGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQT 433
KGRV EV+L D+ + +++ + I + V + F + + + LR +V++ +
Sbjct: 43 KGRVIEVTLFDILKGDPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSS 101
Query: 434 LIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 532
+ +DVKT+DGYV R+ + T + + +K
Sbjct: 102 KVNYIVDVKTSDGYVFRLKVLALTYRHLNTSKK 134
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 41.5 bits (93), Expect = 0.028
Identities = 15/27 (55%), Positives = 22/27 (81%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTT 207
++D F++KDWYDVKA +MF+ R +G T
Sbjct: 21 VIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 40.3 bits (90), Expect = 0.064
Identities = 33/140 (23%), Positives = 65/140 (46%), Gaps = 1/140 (0%)
Frame = +2
Query: 245 EGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKK 424
E + GRV VSL +L D + F+++ V G F+G ++T + +R MVKK
Sbjct: 43 ENVPGRVLTVSLGELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKK 100
Query: 425 WQTLIEANIDVKTTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRD 601
+ +++ I V L+V FT +A+ +QV+ +R KM +++
Sbjct: 101 RASRVDSTITVTPLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDS 151
Query: 602 VTNSELREVVNKLIPDSIAQ 661
++ V+ ++ +++
Sbjct: 152 AKEADFESFVSAMLKGELSK 171
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 39.5 bits (88), Expect = 0.11
Identities = 26/94 (27%), Positives = 47/94 (50%)
Frame = +2
Query: 251 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 430
L GR EV++ +L D + + K R + V G F G TTD +R M+++
Sbjct: 44 LIGRGVEVTMRELSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGT 101
Query: 431 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRK 532
+ I+A+ VKT D +++ + T + + S ++
Sbjct: 102 SRIDASSVVKTKDDRKVKLHVLAVTTRRAKSSQQ 135
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 37.1 bits (82), Expect = 0.59
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 1/121 (0%)
Frame = +2
Query: 260 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTL 436
R EVSL++L D S+ K + Y + + F+G L+ D + MV K L
Sbjct: 62 RNLEVSLSELINDYS---SYYKIIKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKL 118
Query: 437 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 616
+E +I + T V+ +F + +T +L Y + +++R I ++ I + + N
Sbjct: 119 VEFSIKINTLKKKVVEIFVL-YTITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKP 177
Query: 617 L 619
+
Sbjct: 178 I 178
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 36.7 bits (81), Expect = 0.79
Identities = 19/53 (35%), Positives = 32/53 (60%)
Frame = -2
Query: 219 TVDKRGADLPLAEHRRSLDIVPIFASEWVDNLLLNTFFTALRQAFIFPDRHVQ 61
+ +K A++ AE RR L+++P+ S+ V LLL++ F L +FPD H +
Sbjct: 104 SANKGFANISDAEDRRRLNVIPVLLSKRVGCLLLSSLF-PLGNPLVFPDDHCE 155
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 5.5
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -2
Query: 453 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 289
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q0LCG8 Cluster: Phosphatidyl-myo-inositol
alpha-mannosyltransferase; n=1; Herpetosiphon
aurantiacus ATCC 23779|Rep: Phosphatidyl-myo-inositol
alpha-mannosyltransferase - Herpetosiphon aurantiacus
ATCC 23779
Length = 381
Score = 33.9 bits (74), Expect = 5.5
Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Frame = -2
Query: 450 MLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARET 271
+LA+ + CH T H+ + WKLQ+ LR T A+ +L + + ++ ++A ET
Sbjct: 107 LLANSKACHVSTFHIRVDEA----WKLQA-LRLAT--ALGPDLYRHIHGRIAGSQAALET 159
Query: 270 SKTLPFNPSEAIFVPLG-TVDKRGADLPLAE-HRRSLDIVPIF 148
++ + E + G T+D+ A + L H+ + D + +F
Sbjct: 160 AQAIFGTKDEYTIIASGITIDRFDAAVNLPRLHQYNDDKITLF 202
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 9.7
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 604 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 497
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A1HG61 Cluster: Putative uncharacterized protein; n=2;
Ralstonia pickettii|Rep: Putative uncharacterized
protein - Ralstonia pickettii 12J
Length = 209
Score = 33.1 bits (72), Expect = 9.7
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 2/96 (2%)
Frame = -2
Query: 501 KPMQKTRRTYPSVVFTSMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRP--CTYSAINL 328
+P+ K ++Y + + A MR +T++L + S+ ++ L+ C YS +
Sbjct: 58 EPVVKVEQSYWAA--EGLSARMRKARAITLYLMDPAMASLKAVDEAQLKDAGCEYSTEDA 115
Query: 327 NLRKDLSASVSACRSARETSKTLPFNPSEAIFVPLG 220
L + + SV + S R S L F P EA+++ +G
Sbjct: 116 ALIANFAESVESA-SVRSNSFALQFEPREAVYLAVG 150
>UniRef50_P58107 Cluster: Epiplakin; n=11; cellular organisms|Rep:
Epiplakin - Homo sapiens (Human)
Length = 5065
Score = 33.1 bits (72), Expect = 9.7
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = -2
Query: 858 LKRGGLVALPAGSXLFSGFPPCFHXLSPVK-FHQLGDLETGLFQHFHLSXANIAQRVDAH 682
L GGLV PA L + P C L + +H+L +LE G L+ N +R+ H
Sbjct: 130 LATGGLVD-PAQGVLVAPEPACHQGLLDRETWHKLSELEPGTGDLRFLNP-NTLERLTYH 187
Query: 681 XXLSRCPWAMESGINLFTTSLS 616
L RC A SG+ L ++
Sbjct: 188 QLLERCVRAPGSGLALLPLKIT 209
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 864,168,126
Number of Sequences: 1657284
Number of extensions: 17620982
Number of successful extensions: 45825
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 43998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45805
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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