Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L15
         (886 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0043 + 5242496-5242554,5242673-5242778,5243586-5243723,524...   188   5e-48
02_02_0482 - 10819562-10819813,10820773-10820952,10822073-108221...   186   2e-47
12_02_0012 - 12309332-12310228,12311087-12311669,12311945-123120...   186   3e-47
06_03_0290 - 19193707-19193752,19193822-19194090                       28   8.7  

>03_02_0043 +
           5242496-5242554,5242673-5242778,5243586-5243723,
           5243794-5243979,5244075-5244275,5244362-5244460
          Length = 262

 Score =  188 bits (458), Expect = 5e-48
 Identities = 91/146 (62%), Positives = 116/146 (79%)
 Frame = +2

Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
           +GTKIASEGLK RVFEVSLADLQ D D  +++RK RL AE VQG+NVL NF GM  TTDK
Sbjct: 52  QGTKIASEGLKHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDK 109

Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
           LR +VKKWQTLIEA++DVKTTDGY+LR+FCIGFT +     ++TCYAQ +Q+R IR+KM 
Sbjct: 110 LRSLVKKWQTLIEAHVDVKTTDGYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMV 169

Query: 584 EIITRDVTNSELREVVNKLIPDSIAQ 661
           EI+    ++ +L+E+V+K IP+ I +
Sbjct: 170 EIMANQASSCDLKELVSKFIPEVIGK 195



 Score = 59.7 bits (138), Expect = 3e-09
 Identities = 23/35 (65%), Positives = 30/35 (85%)
 Frame = +1

Query: 130 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 234
           VDPF +KDWYD+KAPS+F+ R +G TLV+RTQG +
Sbjct: 21  VDPFAKKDWYDIKAPSVFNVRNIGKTLVSRTQGTK 55


>02_02_0482 -
           10819562-10819813,10820773-10820952,10822073-10822150,
           10823056-10823256,10823365-10823550,10823646-10823783,
           10824396-10824501,10824634-10824692
          Length = 399

 Score =  186 bits (453), Expect = 2e-47
 Identities = 91/146 (62%), Positives = 114/146 (78%)
 Frame = +2

Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
           +GTKIASEGLK RVFEVSLADLQ D D  +++RK RL AE VQGRNVL NF GM  TTDK
Sbjct: 52  QGTKIASEGLKHRVFEVSLADLQNDED--QAYRKVRLRAEDVQGRNVLTNFWGMSFTTDK 109

Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
           LR +VKKWQTLIEA++DVKTTD Y+LR+FCIGFT +     ++TCYAQ +Q+R IR+KM 
Sbjct: 110 LRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMV 169

Query: 584 EIITRDVTNSELREVVNKLIPDSIAQ 661
           EI+    +  +L+E+V+K IP+ I +
Sbjct: 170 EIMANQASTCDLKELVSKFIPEVIGK 195



 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 23/35 (65%), Positives = 31/35 (88%)
 Frame = +1

Query: 130 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 234
           VDPF++KDWYD+KAP++FS R +G TLV+RTQG +
Sbjct: 21  VDPFSKKDWYDIKAPTVFSVRNIGKTLVSRTQGTK 55


>12_02_0012 -
           12309332-12310228,12311087-12311669,12311945-12312051,
           12313190-12313237,12315139-12315216,12315300-12315500,
           12315612-12315797,12315870-12316007,12318311-12318416,
           12318529-12318587
          Length = 800

 Score =  186 bits (452), Expect = 3e-47
 Identities = 90/146 (61%), Positives = 115/146 (78%)
 Frame = +2

Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
           +GTKIASEGLK RVFEVSLADLQ D D  +++RK RL AE VQG+NVL NF GM  TTDK
Sbjct: 52  QGTKIASEGLKHRVFEVSLADLQNDED--QAYRKIRLRAEDVQGKNVLTNFWGMSFTTDK 109

Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
           LR +VKKWQTLIEA++DVKTTD Y+LR+FCIGFT +     ++TCYAQ +Q+R IR+KM 
Sbjct: 110 LRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQIRQIRRKMV 169

Query: 584 EIITRDVTNSELREVVNKLIPDSIAQ 661
           EI+    ++ +L+E+V+K IP+ I +
Sbjct: 170 EIMVNQASSCDLKELVSKFIPEVIGK 195



 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +1

Query: 130 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNE 234
           VDPF +KDWYD+KAPS+F+ R VG TLV+RTQG +
Sbjct: 21  VDPFAKKDWYDIKAPSVFNVRNVGKTLVSRTQGTK 55


>06_03_0290 - 19193707-19193752,19193822-19194090
          Length = 104

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +3

Query: 366 SATSTAWTSQPISSGGWLKNGRLSSKPTLM 455
           +A S A T  P  S GW+  G  S+ P+L+
Sbjct: 67  AAGSAARTRSPSQSNGWITGGSASAMPSLV 96


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,025,678
Number of Sequences: 37544
Number of extensions: 513040
Number of successful extensions: 1306
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1303
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)