Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L15
(886 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal pr... 220 2e-57
AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA, i... 220 2e-57
AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB, i... 209 4e-54
AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p pro... 207 2e-53
Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal prot... 204 1e-52
AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD, i... 135 7e-32
AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-P... 30 4.9
>AF034971-1|AAC62117.1| 268|Drosophila melanogaster ribosomal
protein S3a protein.
Length = 268
Score = 220 bits (538), Expect = 2e-57
Identities = 106/146 (72%), Positives = 123/146 (84%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
+G +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK
Sbjct: 53 QGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDK 112
Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M
Sbjct: 113 YRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMT 172
Query: 584 EIITRDVTNSELREVVNKLIPDSIAQ 661
+IIT +V+ ++L+++VNKL DSIA+
Sbjct: 173 DIITNEVSGADLKQLVNKLALDSIAK 198
Score = 69.7 bits (163), Expect = 5e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-4|AAF59372.1| 268|Drosophila melanogaster CG2168-PA,
isoform A protein.
Length = 268
Score = 220 bits (538), Expect = 2e-57
Identities = 106/146 (72%), Positives = 123/146 (84%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
+G +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK
Sbjct: 53 QGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDK 112
Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M
Sbjct: 113 YRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMT 172
Query: 584 EIITRDVTNSELREVVNKLIPDSIAQ 661
+IIT +V+ ++L+++VNKL DSIA+
Sbjct: 173 DIITNEVSGADLKQLVNKLALDSIAK 198
Score = 69.7 bits (163), Expect = 5e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>AE014135-5|AAN06541.1| 218|Drosophila melanogaster CG2168-PB,
isoform B protein.
Length = 218
Score = 209 bits (510), Expect = 4e-54
Identities = 100/135 (74%), Positives = 114/135 (84%)
Frame = +2
Query: 257 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 436
GRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK R MVKKWQTL
Sbjct: 14 GRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTL 73
Query: 437 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 616
IEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M +IIT +V+ ++
Sbjct: 74 IEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGAD 133
Query: 617 LREVVNKLIPDSIAQ 661
L+++VNKL DSIA+
Sbjct: 134 LKQLVNKLALDSIAK 148
>AY070949-1|AAL48571.1| 217|Drosophila melanogaster RE04220p
protein.
Length = 217
Score = 207 bits (505), Expect = 2e-53
Identities = 98/136 (72%), Positives = 115/136 (84%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
+G +IAS+ LKGRVFEVSLADLQ D D ERSFRKFRLIAE VQ RNVLCNFHGMDLTTDK
Sbjct: 53 QGQRIASDYLKGRVFEVSLADLQKDIDPERSFRKFRLIAEDVQDRNVLCNFHGMDLTTDK 112
Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR IR +M
Sbjct: 113 YRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVRKIRARMT 172
Query: 584 EIITRDVTNSELREVV 631
+IIT +V+ ++L++++
Sbjct: 173 DIITNEVSGADLKQLL 188
Score = 69.7 bits (163), Expect = 5e-12
Identities = 29/47 (61%), Positives = 36/47 (76%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG ++G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYLKGRVF 67
>Y10115-1|CAA71201.1| 270|Drosophila melanogaster ribosomal protein
S3a protein.
Length = 270
Score = 204 bits (499), Expect = 1e-52
Identities = 102/148 (68%), Positives = 119/148 (80%), Gaps = 2/148 (1%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLA-DLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 400
+G +IAS+ KGRVFEVSL DLQ D D E SFRKFRLIAE VQ RNVLCNFHGMDLTTD
Sbjct: 53 QGQRIASDYFKGRVFEVSLVPDLQKDIDPEHSFRKFRLIAEDVQDRNVLCNFHGMDLTTD 112
Query: 401 KLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRK-K 577
K R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYA +QVR IR +
Sbjct: 113 KYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAHESQVRKIRSGR 172
Query: 578 MCEIITRDVTNSELREVVNKLIPDSIAQ 661
M +IIT +V+ ++L+++VNKL DSIA+
Sbjct: 173 MTDIITNEVSGADLKQLVNKLALDSIAK 200
Score = 68.9 bits (161), Expect = 9e-12
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +1
Query: 127 IVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
+VDPF+RKDWYDVKAP+MF RQ+G TLVNRTQG +G+ F
Sbjct: 21 VVDPFSRKDWYDVKAPNMFQTRQIGKTLVNRTQGQRIASDYFKGRVF 67
>AE014135-6|AAN06542.1| 163|Drosophila melanogaster CG2168-PD,
isoform D protein.
Length = 163
Score = 135 bits (327), Expect = 7e-32
Identities = 63/93 (67%), Positives = 77/93 (82%)
Frame = +2
Query: 383 MDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVR 562
MDLTTDK R MVKKWQTLIEA ++ KT DGY+LRVFCIGFT KD SQRKTCYAQ +QVR
Sbjct: 1 MDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCIGFTAKDQQSQRKTCYAQQSQVR 60
Query: 563 AIRKKMCEIITRDVTNSELREVVNKLIPDSIAQ 661
IR +M +IIT +V+ ++L+++VNKL DSIA+
Sbjct: 61 KIRARMTDIITNEVSGADLKQLVNKLALDSIAK 93
>AE014298-2816|AAF48933.1| 1513|Drosophila melanogaster CG12359-PA
protein.
Length = 1513
Score = 29.9 bits (64), Expect = 4.9
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -3
Query: 305 RQCQLVDQPGKLRKLFPSILPKQFSFPWVRLT 210
+ C L+D P +LR FPS LP+ S P + LT
Sbjct: 163 QNCPLIDSPIRLR--FPSPLPEPPSLPTITLT 192
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,176,020
Number of Sequences: 53049
Number of extensions: 836543
Number of successful extensions: 2348
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2346
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4311772920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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