Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L15
(886 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical pr... 174 6e-44
Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical pr... 30 1.9
U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein. 30 1.9
U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-l... 29 5.8
U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-l... 29 5.8
AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interacto... 29 5.8
AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic helix-l... 28 7.7
>Z32681-6|CAA83605.1| 257|Caenorhabditis elegans Hypothetical
protein F56F3.5 protein.
Length = 257
Score = 174 bits (424), Expect = 6e-44
Identities = 89/146 (60%), Positives = 108/146 (73%)
Frame = +2
Query: 224 RGTKIASEGLKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDK 403
+GTKIASEGLKGRVFEVSL DL ++E FRKF+LIAE VQG+NVL NFH M +T DK
Sbjct: 51 QGTKIASEGLKGRVFEVSLGDLN---NSEADFRKFKLIAEDVQGKNVLTNFHAMSMTHDK 107
Query: 404 LRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMC 583
L +VKKW TLIEAN VKTTDGY LRVF I FT K +KT Y + +++R IR +M
Sbjct: 108 LCSIVKKWHTLIEANTAVKTTDGYTLRVFVIAFTKKSVNQVKKTSYTKTSKIRKIRSEMI 167
Query: 584 EIITRDVTNSELREVVNKLIPDSIAQ 661
I ++VT +L+EVV+KLIPDSI +
Sbjct: 168 GCIEKEVTGCDLKEVVSKLIPDSIGK 193
Score = 66.9 bits (156), Expect = 2e-11
Identities = 27/46 (58%), Positives = 37/46 (80%)
Frame = +1
Query: 130 VDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGNENCFGRIEGKSF 267
VDPF+RK+WYD+KAP+MF+ RQVG TL+NRTQG + ++G+ F
Sbjct: 20 VDPFSRKEWYDIKAPNMFNTRQVGKTLINRTQGTKIASEGLKGRVF 65
>Z70680-3|CAA94575.1| 1263|Caenorhabditis elegans Hypothetical protein
C25G4.5 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 435 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 259
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 258 PFNPSEAI 235
N SE++
Sbjct: 1182 VLNSSESL 1189
>Z66497-4|CAA91284.1| 401|Caenorhabditis elegans Hypothetical
protein K08F8.2 protein.
Length = 401
Score = 30.3 bits (65), Expect = 1.9
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Frame = -2
Query: 447 LASMRVCHFLTIHLSLSVVRSMPWKLQ-STLRPCTY-SAINLNLRKDLSASVSACRSARE 274
+AS++ LT+ L L +P LQ L+P T S + + ++ S S S+ S+
Sbjct: 132 IASLQASSMLTVPL-LQAASHIPSMLQLCQLQPTTIQSPVYASTQQPASTSASSLFSSSS 190
Query: 273 TSKTLPFNPSEA 238
+S PF PSE+
Sbjct: 191 SSAFHPFRPSES 202
>U43562-1|AAC47411.1| 1263|Caenorhabditis elegans DPY-26 protein.
Length = 1263
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2
Query: 435 RVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSACRSARE-TSKTL 259
R H H LS+ SMP ++ T+RP + + L++ + + + RS R S +
Sbjct: 1122 RKVHINGCHTLLSLALSMPSRMGETVRPSSIVSFLLHIANENNLQIVQDRSKRSWMSDFI 1181
Query: 258 PFNPSEAI 235
N SE++
Sbjct: 1182 VLNSSESL 1189
>U10401-4|AAN65289.1| 937|Caenorhabditis elegans Myc and mondo-like
protein 1, isoformb protein.
Length = 937
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Frame = -2
Query: 399 SVVRSMPWKLQSTLRPCTYSAINL----NLRKDLSASVSACRSARETSKTLPFNPSEAIF 232
S+V M WK + Y + NL D V+ C S +S T
Sbjct: 156 SIVEGMYWKRKMEGVCAQYKRWRIRSKHNLVTDKGGMVATCSSTSVSSMTGELKRKRKHT 215
Query: 231 VPLGTVDK--RGADLPLAEHRRSLD---IVPIFASEW--VDNLLLNTFFTALRQAFIFPD 73
VP T++ R + P+ R I FA ++ +DN+ + F +L + ++FPD
Sbjct: 216 VPKETIESKLRSYEPPVKLQRSQTPKHTISDEFAWDFDDLDNVFTDDFLNSLSEPYMFPD 275
>U10401-3|AAA19059.2| 1009|Caenorhabditis elegans Myc and mondo-like
protein 1, isoforma protein.
Length = 1009
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Frame = -2
Query: 399 SVVRSMPWKLQSTLRPCTYSAINL----NLRKDLSASVSACRSARETSKTLPFNPSEAIF 232
S+V M WK + Y + NL D V+ C S +S T
Sbjct: 156 SIVEGMYWKRKMEGVCAQYKRWRIRSKHNLVTDKGGMVATCSSTSVSSMTGELKRKRKHT 215
Query: 231 VPLGTVDK--RGADLPLAEHRRSLD---IVPIFASEW--VDNLLLNTFFTALRQAFIFPD 73
VP T++ R + P+ R I FA ++ +DN+ + F +L + ++FPD
Sbjct: 216 VPKETIESKLRSYEPPVKLQRSQTPKHTISDEFAWDFDDLDNVFTDDFLNSLSEPYMFPD 275
>AF264757-1|AAK20949.1| 1009|Caenorhabditis elegans Mlx interactor
protein.
Length = 1009
Score = 28.7 bits (61), Expect = 5.8
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Frame = -2
Query: 399 SVVRSMPWKLQSTLRPCTYSAINL----NLRKDLSASVSACRSARETSKTLPFNPSEAIF 232
S+V M WK + Y + NL D V+ C S +S T
Sbjct: 156 SIVEGMYWKRKMEGVCAQYKRWRIRSKHNLVTDKGGMVATCSSTSVSSMTGELKRKRKHT 215
Query: 231 VPLGTVDK--RGADLPLAEHRRSLD---IVPIFASEW--VDNLLLNTFFTALRQAFIFPD 73
VP T++ R + P+ R I FA ++ +DN+ + F +L + ++FPD
Sbjct: 216 VPKETIESKLRSYEPPVKLQRSQTPKHTISDEFAWDFDDLDNVFTDDFLNSLSEPYMFPD 275
>AF213473-1|AAL50027.1| 913|Caenorhabditis elegans basic
helix-loop-helix leucinezipper WBSCR14-like protein
protein.
Length = 913
Score = 28.3 bits (60), Expect = 7.7
Identities = 30/120 (25%), Positives = 48/120 (40%), Gaps = 11/120 (9%)
Frame = -2
Query: 399 SVVRSMPWKLQSTLRPCTYSAINL----NLRKDLSASVSACRSARETSKTLPFNPSEAIF 232
S+V M WK + Y + NL D V+ C S +S T
Sbjct: 60 SIVEGMYWKRKMGGVCAQYKRWRIRSKHNLVTDKGGMVATCSSTSVSSMTGELKRKRKHT 119
Query: 231 VPLGTVDK--RGADLPLAEHRRSLD---IVPIFASEW--VDNLLLNTFFTALRQAFIFPD 73
VP T++ R + P+ R I FA ++ +DN+ + F +L + ++FPD
Sbjct: 120 VPKETIESKLRSYEPPVKLQRSQTPKHTISDEFAWDFDDLDNVFTDDFLNSLSEPYMFPD 179
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,817,096
Number of Sequences: 27780
Number of extensions: 419371
Number of successful extensions: 1071
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1006
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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