Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L14
         (880 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    23   4.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   5.5  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   7.3  
AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve co...    22   7.3  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    22   7.3  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   9.7  

>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +1

Query: 298 QKMKVNLRNHYKNKKYKPL 354
           +K   ++ N Y N KYKPL
Sbjct: 24  KKTVFDIPNDYLNDKYKPL 42


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = +3

Query: 324 PLQKQEIQAFRFKSQEDPCYAQGSY*TRSKDQD 422
           P   +  +AF+ K   DP   +GSY  R  D++
Sbjct: 348 PQNAKTQKAFQVKRVPDPSKRKGSYIFRLPDEN 380


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 441 LSDLFPRLDLCFVFSKSLAH 382
           ++DL P  D C     +LAH
Sbjct: 56  ITDLDPSADYCLFLEMTLAH 75


>AY695256-1|AAW21973.1|  168|Tribolium castaneum ventral nerve cord
           defective protein protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/30 (33%), Positives = 10/30 (33%)
 Frame = +3

Query: 561 PXPXPXXXXXPXXXGXGFPXXGGGXXPPXP 650
           P P P     P     G P   GG   P P
Sbjct: 112 PLPSPRRVAVPVLVRDGKPCLSGGPKHPDP 141


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -1

Query: 199 LLILSLAPQAV*IAPFYLLSLILNTSLCPF 110
           LLIL      + + P+YLL  + N    PF
Sbjct: 272 LLILFSCLLHLVVTPYYLLIEVCNAGYLPF 301


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.4 bits (43), Expect = 9.7
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -2

Query: 792 GGGXXGGGXXXGXPAPXFGPXE 727
           GG   GG    G P P F P +
Sbjct: 66  GGPPSGGQPPQGMPYPRFPPYD 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,718
Number of Sequences: 336
Number of extensions: 3477
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24306755
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)