Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L13
         (890 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      24   1.8  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      24   1.8  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    24   1.8  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    24   1.8  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   4.3  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    23   4.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   4.3  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   7.4  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   9.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.8  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 740 PPPPPTXSXPXXXPXXTNP 796
           PPPP     P   P  TNP
Sbjct: 736 PPPPHPHHQPPRNPVGTNP 754


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/19 (47%), Positives = 9/19 (47%)
 Frame = +2

Query: 740 PPPPPTXSXPXXXPXXTNP 796
           PPPP     P   P  TNP
Sbjct: 628 PPPPHPHHQPPRNPVGTNP 646


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/41 (29%), Positives = 14/41 (34%)
 Frame = +1

Query: 706 EXPPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPS 828
           E  P      P  PP   +     P    PP P PP   P+
Sbjct: 152 EPNPSIIDPGPALPPAGFLCNNYLPLPQVPPLPLPPIFAPT 192


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 12/41 (29%), Positives = 14/41 (34%)
 Frame = +1

Query: 706 EXPPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPS 828
           E  P      P  PP   +     P    PP P PP   P+
Sbjct: 152 EPNPSIIDPGPALPPTGFLCNNYPPLPQVPPLPLPPIFPPT 192


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 793 PPPPXPPR 816
           PPPP PPR
Sbjct: 731 PPPPPPPR 738


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +1

Query: 448 KKKKXXXXRGSPXTXGXXXSXPXSPPPPXPP 540
           K++     R SP         P +PP P PP
Sbjct: 74  KREIPSPKRSSPILAEKVSVSPTTPPTPSPP 104


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 4.3
 Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
 Frame = +2

Query: 737 PPPPPPTXSXPXXXPXXTNP---PPP 805
           PPP P + + P      T+P   PPP
Sbjct: 11  PPPAPQSAATPISSSGMTSPAAAPPP 36


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 73  NVSNEKFYCIVVCC 114
           N +N K+Y + VCC
Sbjct: 49  NNTNRKYYWLNVCC 62


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +2

Query: 107 FVVAAVGYVTGQHFPT 154
           FV   +GY   QHF T
Sbjct: 421 FVAFTIGYDLNQHFET 436


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 11/40 (27%), Positives = 17/40 (42%)
 Frame = +2

Query: 212 DCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPE 331
           D  N  +   +D++   D  +   D  N+R  K    VPE
Sbjct: 122 DASNGNLKFSIDNILKADFGRRITDPINIRKCKPKTVVPE 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,396
Number of Sequences: 336
Number of extensions: 4231
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)