Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP03_F_L13
(890 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.004
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.010
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 30 0.012
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 35 0.014
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.024
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.031
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 33 0.055
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.29
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.89
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 29 1.2
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 23 4.3
SPAC23D3.10c |eng2||endo-1,3-beta-glucanase Eng2|Schizosaccharom... 26 6.3
SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyc... 26 6.3
SPBC317.01 |mbx2|pvg4|MADS-box transcription factor Pvg4|Schizos... 26 8.3
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.3
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.004
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +1
Query: 712 PPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXPP 858
PPP P P P P P PPPP PP P PP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 33.9 bits (74), Expect = 0.031
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = +2
Query: 659 PXLXSFPPPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXPXXTNPPPP 805
P P P P PP PPPPPP P PPPP
Sbjct: 736 PPAVIVPTPAPAP-IPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.1 bits (72), Expect = 0.055
Identities = 17/51 (33%), Positives = 19/51 (37%)
Frame = +1
Query: 712 PPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXPPTQ 864
P P PPPPP V P PPPP PP +P P +
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPP----PPPPPPPAVSAGGSRYYAPAPQAE 800
Score = 31.9 bits (69), Expect = 0.13
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 737 PPPPPPTXSXPXXXPXXTNPPPPXP 811
PPPPPP P P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 29.5 bits (63), Expect = 0.67
Identities = 17/53 (32%), Positives = 17/53 (32%), Gaps = 4/53 (7%)
Frame = +2
Query: 665 LXSFPPPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXP----XXTNPPPPXP 811
L PPP P P PPP P P P PPPP P
Sbjct: 728 LLKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/75 (28%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = +2
Query: 602 PPPLHXXPKKSXXXXXXXXPX-LXSFPPPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXX 778
PPP P + P + PPP P PP PPPPPP P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP------PPPGVAGAGPPPPPP--PPPAVS 786
Query: 779 PXXTNPPPPXPXXXP 823
+ P P P
Sbjct: 787 AGGSRYYAPAPQAEP 801
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 511 PXSPPPPXPPXNXGXXXPPKKTPXXWXNXXPPPPSXXP 624
P P P P G PP P PPPP P
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.3
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +3
Query: 657 PPXCXXFPPXXPAXXXRXPPPXXXXXSPPPP 749
PP P PA PPP PPPP
Sbjct: 735 PPPAVIVPTPAPAPIP-VPPPAPIMGGPPPP 764
Score = 23.8 bits (49), Expect(2) = 2.0
Identities = 13/35 (37%), Positives = 13/35 (37%), Gaps = 3/35 (8%)
Frame = +1
Query: 517 SPPPPXPPXNXGXXXP---PKKTPXXWXNXXPPPP 612
SPPPP P P P P PPPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPP 765
Score = 22.2 bits (45), Expect(2) = 2.0
Identities = 11/36 (30%), Positives = 12/36 (33%), Gaps = 2/36 (5%)
Frame = +1
Query: 712 PPPXXXXX--PPPPPXXXVXPXXXPXXHQPPPPXPP 813
PPP PPPPP + P P P
Sbjct: 766 PPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.5 bits (78), Expect = 0.010
Identities = 20/58 (34%), Positives = 22/58 (37%), Gaps = 9/58 (15%)
Frame = +2
Query: 677 PPPXPRXKXXXXPP-----XXXXFXPPPPPP----TXSXPXXXPXXTNPPPPXPXXXP 823
PPP P + PP PPPPPP S P + PPPP P P
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 33.9 bits (74), Expect = 0.031
Identities = 33/140 (23%), Positives = 38/140 (27%), Gaps = 16/140 (11%)
Frame = +1
Query: 517 SPPPPXPPXNXGXXXPPKKTPXXWX--------NXXPPPPSXXPQKKXFXXXXXXXXXXX 672
+PPP PP N PP P N PP P +
Sbjct: 252 APPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRP 311
Query: 673 XXXXXXXXKXXEXPP-----PXXXXXPPPPPXXXVXPXXXPXXHQ---PPPPXPPRXXPS 828
+ PP PPPPP P Q PPP PPR PS
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 829 FFXXXSPXPPTQKXXXXPLP 888
P ++ P P
Sbjct: 372 TGRQPPPLSSSRAVSNPPAP 391
Score = 30.3 bits (65), Expect = 0.38
Identities = 34/142 (23%), Positives = 36/142 (25%), Gaps = 3/142 (2%)
Frame = +1
Query: 472 RGSPXTXGXXXSXPXSPPPPXPPXNXGXXXPPKKTPXXWXNXXPPP---PSXXPQKKXFX 642
RG P G S PPPP PP + P PPP PS Q
Sbjct: 322 RGKPPI-GNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLS 380
Query: 643 XXXXXXXXXXXXXXXXXXKXXEXPPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXX 822
PP PP P P PP P
Sbjct: 381 SSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP-TPPSLPPSAPPSLPPSAPPSL 439
Query: 823 PSFFXXXSPXPPTQKXXXXPLP 888
P P PP+ PLP
Sbjct: 440 PMGAPAAPPLPPS-APIAPPLP 460
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/113 (21%), Positives = 30/113 (26%)
Frame = +1
Query: 520 PPPPXPPXNXGXXXPPKKTPXXWXNXXPPPPSXXPQKKXFXXXXXXXXXXXXXXXXXXXK 699
PPPP + G PP + N PPP+ +
Sbjct: 363 PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPS 422
Query: 700 XXEXPPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXPP 858
PP P PP + P P PP P+ P PP
Sbjct: 423 LPPSAPP--SLPPSAPPSLPMGAPAAPPLPPSAPIAPP--LPAGMPAAPPLPP 471
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
Frame = +2
Query: 680 PPXPRXKXXXXPPXXXXFXPPPPPPT--XSXPXXXPXXTNPPPPXP 811
PP P P PP PPP+ S PPPP P
Sbjct: 271 PPRPIAPVSMNPAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPP 316
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +2
Query: 677 PPPXPRXKXXXX-P-PXXXXFXPPPPPPTXSXPXXXPXXTNPPPP 805
PPP PR P P PPPPPP + P PPP
Sbjct: 339 PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSA-----PSTGRQPPP 378
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/45 (28%), Positives = 16/45 (35%)
Frame = +2
Query: 677 PPPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXP 811
PP P + P PPP PP + P + P P P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 26.2 bits (55), Expect = 6.3
Identities = 27/113 (23%), Positives = 31/113 (27%), Gaps = 5/113 (4%)
Frame = +2
Query: 563 PXKKXXXXGXIXXPPPLHXXPKKSXXXXXXXXPXLXSFPPPXPRXKXXXXPPXXXXFXPP 742
P + G I PP P P PPP + PP PP
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSA---PSTGRQPPPLSSSRAVSNPPA-----PP 392
Query: 743 PPPPTXSXPXXXPXX-----TNPPPPXPXXXPLLFXXXXPXXXPHKXXXXXPS 886
P P S P P + PP P P P P P P+
Sbjct: 393 PAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPA 445
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.9 bits (64), Expect(2) = 0.012
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Frame = +1
Query: 712 PPPXXXXXPPPPPXXXVXPXXXPXXHQPPPP-XPPRXXPSFFXXXSPXPP 858
PPP PP P P P QP P P PS P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/67 (26%), Positives = 20/67 (29%), Gaps = 1/67 (1%)
Frame = +2
Query: 605 PPLHXXPKKSXXXXXXXX-PXLXSFPPPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXP 781
PP P+ S P + S PP P P PP P S P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMP 198
Query: 782 XXTNPPP 802
PPP
Sbjct: 199 PKVPPPP 205
Score = 26.2 bits (55), Expect = 6.3
Identities = 13/39 (33%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Frame = +1
Query: 715 PPXXXXXPPP--PPXXXVXPXXXPXXHQPPPPXPPRXXP 825
PP PPP P P P PP PP+ P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 24.2 bits (50), Expect(2) = 0.012
Identities = 15/52 (28%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +1
Query: 475 GSPXTXGXXXSXPXSPPP--PXPPXNXGXXXPPKKTPXXWXNXXPPPPSXXP 624
G P S + PP P PP PP P + PP P+ P
Sbjct: 108 GMPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPR-PSIPPPSPASAP 158
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 35.1 bits (77), Expect = 0.014
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 3/62 (4%)
Frame = -1
Query: 824 GXXRGGXGG--GGWCXXGXKXGXTXXXGGGGGXXXXXG-GGXSXXXGGGXGGEXXAXGGX 654
G RGG GG GG G G G GG G GG GG GG A GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGA 71
Query: 653 XI 648
+
Sbjct: 72 KV 73
Score = 32.7 bits (71), Expect = 0.072
Identities = 22/54 (40%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Frame = -1
Query: 815 RGGXGGGGWCXXGXKXGXTXXXGG-GGGXXXXXGGGXSXXXGGGXGGEXXAXGG 657
RGG GG G + G GG GGG GGG GG GG A GG
Sbjct: 8 RGGRGGS----RGGRGGFNGGRGGFGGGRGGARGGGRGGAR-GGRGGRGGARGG 56
Score = 30.7 bits (66), Expect = 0.29
Identities = 17/53 (32%), Positives = 19/53 (35%)
Frame = -1
Query: 815 RGGXGGGGWCXXGXKXGXTXXXGGGGGXXXXXGGGXSXXXGGGXGGEXXAXGG 657
RGG GG G + G GG G G GG GG + GG
Sbjct: 11 RGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 27.5 bits (58), Expect = 2.7
Identities = 20/59 (33%), Positives = 22/59 (37%)
Frame = -1
Query: 890 GGRGXXXXFCVGGXGXXXXKKEGXXRGGXGGGGWCXXGXKXGXTXXXGGGGGXXXXXGG 714
G RG F GG G + G GG GG G + G GG GG GG
Sbjct: 13 GSRGGRGGFN-GGRGGFGGGRGGARGGGRGGA----RGGRGGRGGARGGRGGSSGGRGG 66
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = +2
Query: 602 PPPLHXXPKKSXXXXXXXXPXLXSFPPPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXP 781
P P P P S PP P+ P PP P P+ P P
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 782 XXTNPPPPXP 811
T PP P P
Sbjct: 1213 PSTAPPVPTP 1222
Score = 34.3 bits (75), Expect = 0.024
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 680 PPXPRXKXXXXP-PXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXPXXXP 823
PP P P P PP PPP+ + P P PP P P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 33.9 bits (74), Expect = 0.031
Identities = 16/49 (32%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 680 PPXPRXKXXXXP-PXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXPXXXP 823
PP P+ P P PP P P+ + P P PP P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAP 1140
Score = 33.5 bits (73), Expect = 0.041
Identities = 20/77 (25%), Positives = 25/77 (32%)
Frame = +2
Query: 593 IXXPPPLHXXPKKSXXXXXXXXPXLXSFPPPXPRXKXXXXPPXXXXFXPPPPPPTXSXPX 772
+ P + PK S P + PP P P PP P P+ + P
Sbjct: 1085 VPAPSGIPPVPKPSVAAPPVPKPSVAV--PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 773 XXPXXTNPPPPXPXXXP 823
P PP P P P
Sbjct: 1143 PKPSVAAPPVPAPSGAP 1159
Score = 33.1 bits (72), Expect = 0.055
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +2
Query: 680 PPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXP 811
PP P P PP PPP+ + P P PP P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 31.1 bits (67), Expect = 0.22
Identities = 14/44 (31%), Positives = 16/44 (36%)
Frame = +2
Query: 680 PPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXP 811
PP P P PP P P+ + P P PP P P
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/47 (31%), Positives = 16/47 (34%)
Frame = +1
Query: 715 PPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXP 855
PP P P P + P P PP P P PS S P
Sbjct: 1211 PPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVSTPRSSVP 1257
Score = 30.3 bits (65), Expect = 0.38
Identities = 17/55 (30%), Positives = 18/55 (32%)
Frame = +2
Query: 659 PXLXSFPPPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXPXXXP 823
P L S PP P P PP P PT + P P P P P
Sbjct: 1015 PKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAP 1069
Score = 29.5 bits (63), Expect = 0.67
Identities = 17/61 (27%), Positives = 18/61 (29%), Gaps = 2/61 (3%)
Frame = +1
Query: 712 PPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPR--XXPSFFXXXSPXPPTQKXXXXPL 885
P P P P P + P P PP P P P P PP P
Sbjct: 1162 PKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPT 1221
Query: 886 P 888
P
Sbjct: 1222 P 1222
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/44 (29%), Positives = 16/44 (36%)
Frame = +2
Query: 680 PPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXP 811
PP P+ P PP P P+ + P PP P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 28.7 bits (61), Expect = 1.2
Identities = 24/113 (21%), Positives = 25/113 (22%)
Frame = +1
Query: 520 PPPPXPPXNXGXXXPPKKTPXXWXNXXPPPPSXXPQKKXFXXXXXXXXXXXXXXXXXXXK 699
P PP PP P P P P K
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 700 XXEXPPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXPP 858
P P PP P P P PP P P P + PP
Sbjct: 1186 AGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPP 1238
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/49 (30%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +2
Query: 680 PPXPRXKXXXXP-PXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXPXXXP 823
PP P+ P P PP P P+ + P P T P P P
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAP 1060
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/44 (29%), Positives = 15/44 (34%)
Frame = +2
Query: 680 PPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXP 811
PP P P PP P P+ + P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/45 (31%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +2
Query: 680 PPXPRXKXXXXP-PXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXP 811
PP P+ P P P P P + P P PP P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 27.5 bits (58), Expect = 2.7
Identities = 18/60 (30%), Positives = 20/60 (33%), Gaps = 1/60 (1%)
Frame = +1
Query: 712 PPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXP-PTQKXXXXPLP 888
P P P P P V P P PP P P P + P PT P+P
Sbjct: 1172 PAPSSGIPPVPKPAAGV-PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 27.1 bits (57), Expect = 3.6
Identities = 13/48 (27%), Positives = 14/48 (29%)
Frame = +2
Query: 680 PPXPRXKXXXXPPXXXXFXPPPPPPTXSXPXXXPXXTNPPPPXPXXXP 823
P P P P P P + P P PP P P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/75 (25%), Positives = 22/75 (29%), Gaps = 1/75 (1%)
Frame = +2
Query: 602 PPPLHXXPKKSXXXXXXXXPXLXSFPPPXPRXKXXXXP-PXXXXFXPPPPPPTXSXPXXX 778
PPP P P S PP P P P PP P P+ P
Sbjct: 1192 PPPSEAPPVPKPSVGVPPVPP-PSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSSEAPSVS 1250
Query: 779 PXXTNPPPPXPXXXP 823
++ P P P
Sbjct: 1251 TPRSSVPSPHSNASP 1265
Score = 26.6 bits (56), Expect = 4.7
Identities = 25/127 (19%), Positives = 31/127 (24%), Gaps = 1/127 (0%)
Frame = +1
Query: 511 PXSPPPPXPPXNXGXXXP-PKKTPXXWXNXXPPPPSXXPQKKXFXXXXXXXXXXXXXXXX 687
P + PP P + P P TP + P + P
Sbjct: 1027 PSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVP 1086
Query: 688 XXXKXXEXPPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXPPTQK 867
P P P P P V P P P P P +P P
Sbjct: 1087 APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS 1146
Query: 868 XXXXPLP 888
P+P
Sbjct: 1147 VAAPPVP 1153
Score = 26.2 bits (55), Expect = 6.3
Identities = 15/52 (28%), Positives = 15/52 (28%)
Frame = +1
Query: 712 PPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXPPTQK 867
P P PP P P PP P P P S PP K
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Score = 25.8 bits (54), Expect = 8.3
Identities = 16/61 (26%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Frame = +1
Query: 715 PPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSF---FXXXSPXPPTQKXXXXPL 885
P PP P P P PP P P P P PP + P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPK 1202
Query: 886 P 888
P
Sbjct: 1203 P 1203
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.024
Identities = 16/48 (33%), Positives = 17/48 (35%)
Frame = +1
Query: 712 PPPXXXXXPPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXP 855
PP PPPPP P P PP PP P+ P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = +2
Query: 671 SFPPPXPRXKXXXXPPXXXXFXPPPPP-PTXSXPXXXPXXTNPPPPXPXXXP 823
S PP P+ PP PPPPP P P PP P P
Sbjct: 1688 STPPVRPQSAA---PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.031
Identities = 23/60 (38%), Positives = 23/60 (38%)
Frame = -1
Query: 857 GGXGXXXXKKEGXXRGGXGGGGWCXXGXKXGXTXXXGGGGGXXXXXGGGXSXXXGGGXGG 678
GG G G GG GGG G G GG GG GGG GGG GG
Sbjct: 211 GGFGGEGHHHGG--HGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG-GFGGGPGG 267
Score = 33.1 bits (72), Expect = 0.055
Identities = 23/56 (41%), Positives = 24/56 (42%), Gaps = 4/56 (7%)
Frame = -1
Query: 812 GGXGG-GGWCXXGXKXGXTXXXGGG-GGXXXXXG--GGXSXXXGGGXGGEXXAXGG 657
GG GG GG+ G G GGG GG G GG GGG GG GG
Sbjct: 205 GGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Score = 32.3 bits (70), Expect = 0.095
Identities = 28/91 (30%), Positives = 29/91 (31%), Gaps = 1/91 (1%)
Frame = -1
Query: 779 GXKXGXTXXXGGGGGXXXXXGGGXSXXXGGGXGGEXXAXGG-XXIXXXXXFFWGXXEGGG 603
G G GGG G GG GG GGE GG F G G G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGF--GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFG 241
Query: 602 GXXLXXXXGVFXGGXXXPXLXGGXGGGGEXG 510
G G+ G GG GG G G
Sbjct: 242 GGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 33.1 bits (72), Expect = 0.055
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 740 PPPPPTXSXPXXXPXXTNPPPP 805
PPPPPT S P +PPPP
Sbjct: 908 PPPPPTASMTASAPAIASPPPP 929
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/25 (52%), Positives = 13/25 (52%)
Frame = +2
Query: 737 PPPPPPTXSXPXXXPXXTNPPPPXP 811
PPPPPP P P PPPP P
Sbjct: 9 PPPPPPP---PGFEPPSQPPPPPPP 30
Score = 29.1 bits (62), Expect = 0.89
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 511 PXSPPPPXPPXNXGXXXPPKKTPXXWXNXXPPPPSXXPQKK 633
P +PPPP PP PP + P PPPP ++K
Sbjct: 6 PGNPPPPPPPPG---FEPPSQPP------PPPPPGYVKKRK 37
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.1 bits (62), Expect = 0.89
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 3/35 (8%)
Frame = +1
Query: 718 PXXXXXPPP---PPXXXVXPXXXPXXHQPPPPXPP 813
P PPP PP P + PPPP PP
Sbjct: 161 PNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +2
Query: 740 PPPPPTXSXPXXXPXXTNPPPPXPXXXP 823
P PPT + P PPPP P P
Sbjct: 221 PEIPPTYTPKQADPLPAPPPPPPPTLPP 248
Score = 23.0 bits (47), Expect(2) = 7.2
Identities = 15/63 (23%), Positives = 16/63 (25%)
Frame = +1
Query: 562 PPKKTPXXWXNXXPPPPSXXPQKKXFXXXXXXXXXXXXXXXXXXXKXXEXPPPXXXXXPP 741
PP TP PPP P + PPP PP
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPP 283
Query: 742 PPP 750
PP
Sbjct: 284 RPP 286
Score = 21.0 bits (42), Expect(2) = 7.2
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = +1
Query: 517 SPPPPXPP 540
+PPPP PP
Sbjct: 188 NPPPPPPP 195
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/53 (35%), Positives = 21/53 (39%), Gaps = 1/53 (1%)
Frame = -1
Query: 833 KKEGXXRGGXGGGGWCXXGXKXGXTXXXGG-GGGXXXXXGGGXSXXXGGGXGG 678
K +G G G GG G + G GG GG GGG GGG G
Sbjct: 126 KPKGARNGPAGRGG--RGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRG 176
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/53 (32%), Positives = 18/53 (33%)
Frame = -1
Query: 815 RGGXGGGGWCXXGXKXGXTXXXGGGGGXXXXXGGGXSXXXGGGXGGEXXAXGG 657
RGG GG G G + GGG GG GG GG G
Sbjct: 140 RGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFRG 192
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/49 (32%), Positives = 16/49 (32%)
Frame = -1
Query: 824 GXXRGGXGGGGWCXXGXKXGXTXXXGGGGGXXXXXGGGXSXXXGGGXGG 678
G RGG GG G G GG GG GG GG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 3.6
Identities = 25/100 (25%), Positives = 28/100 (28%), Gaps = 5/100 (5%)
Frame = +1
Query: 520 PPPPXPPXNXGXXXPPKKTPXXWXNXXPPPPSXXPQKKXFXXXXXXXXXXXXXXXXXXXK 699
PPPP PP + PPP P + +
Sbjct: 221 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 280
Query: 700 XXEX-PPPXXXXXP----PPPPXXXVXPXXXPXXHQPPPP 804
E PPP P PPPP P H PPPP
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHH-----EPGEHMPPPP 315
Score = 27.1 bits (57), Expect = 3.6
Identities = 25/100 (25%), Positives = 28/100 (28%), Gaps = 5/100 (5%)
Frame = +1
Query: 520 PPPPXPPXNXGXXXPPKKTPXXWXNXXPPPPSXXPQKKXFXXXXXXXXXXXXXXXXXXXK 699
PPPP PP + PPP P + +
Sbjct: 234 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 293
Query: 700 XXEX-PPPXXXXXP----PPPPXXXVXPXXXPXXHQPPPP 804
E PPP P PPPP P H PPPP
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHH-----EPGEHMPPPP 328
Score = 27.1 bits (57), Expect = 3.6
Identities = 25/100 (25%), Positives = 28/100 (28%), Gaps = 5/100 (5%)
Frame = +1
Query: 520 PPPPXPPXNXGXXXPPKKTPXXWXNXXPPPPSXXPQKKXFXXXXXXXXXXXXXXXXXXXK 699
PPPP PP + PPP P + +
Sbjct: 247 PPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHE 306
Query: 700 XXEX-PPPXXXXXP----PPPPXXXVXPXXXPXXHQPPPP 804
E PPP P PPPP P H PPPP
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHH-----EPGEHMPPPP 341
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.0 bits (47), Expect(2) = 4.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 731 FXPPPPPP 754
F PPPPPP
Sbjct: 944 FPPPPPPP 951
Score = 21.8 bits (44), Expect(2) = 4.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 737 PPPPPPTXS 763
PPPPPP S
Sbjct: 948 PPPPPPLVS 956
>SPAC23D3.10c |eng2||endo-1,3-beta-glucanase
Eng2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 706
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 3/29 (10%)
Frame = -3
Query: 276 HCGTSHGPTWS---TKSWTSGFSQSGSAI 199
+ GT H P+WS + +W +G S G AI
Sbjct: 45 YIGTRHNPSWSHPYSVTWLNGSSYYGLAI 73
>SPAC8C9.17c |spc34||DASH complex subunit Spc34|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 164
Score = 26.2 bits (55), Expect = 6.3
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = -1
Query: 179 NVHLSGIFSLENVAR*RNRQLPQ 111
N+H+SGI +LENV + QL Q
Sbjct: 103 NLHMSGIENLENVLLEQKEQLQQ 125
>SPBC317.01 |mbx2|pvg4|MADS-box transcription factor
Pvg4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 372
Score = 25.8 bits (54), Expect = 8.3
Identities = 13/41 (31%), Positives = 14/41 (34%)
Frame = +1
Query: 736 PPPPPXXXVXPXXXPXXHQPPPPXPPRXXPSFFXXXSPXPP 858
PP PP P P H P P P + SP P
Sbjct: 161 PPFPPTQHHHPHTRPPHHPPHPHFHNNNYPPPYCFQSPVSP 201
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.3
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 740 PPPPPTXSXPXXXPXXTNPPPPXPXXXP 823
PPPPP + P P P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGP 1909
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,797,117
Number of Sequences: 5004
Number of extensions: 56779
Number of successful extensions: 544
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 145
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 448490560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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