Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L12
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0160 + 22829401-22830658,22831671-22831703,22832586-22832728     29   5.1  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.9  
07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708     28   8.9  

>05_05_0160 + 22829401-22830658,22831671-22831703,22832586-22832728
          Length = 477

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -3

Query: 484 GVWLTCCFLRYPLILWITVLPPWSE 410
           GV +  C L +P+ L   VLPPW E
Sbjct: 388 GVMIGSCLLEHPIGLTPCVLPPWLE 412


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +2

Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>07_03_1037 - 23438205-23441219,23443509-23444513,23444627-23446708
          Length = 2033

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 19/58 (32%), Positives = 23/58 (39%)
 Frame = -3

Query: 604  GXSATCGXGASILVMLGAGGAEPMEKRQQGGPFYGSXPFAGVWLTCCFLRYPLILWIT 431
            G    C  GA +L   GA GA+P    +  G      P A        LRYP  L +T
Sbjct: 1191 GERVLCMVGAGVLPTRGADGADPWGWAKNSGRAGFQPPVATDESMLLVLRYPKELTLT 1248


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,905,904
Number of Sequences: 37544
Number of extensions: 335431
Number of successful extensions: 954
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 954
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)