Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP03_F_L12
         (909 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g20830.1 68416.m02634 protein kinase family protein contains ...    28   7.4  
At2g34090.2 68415.m04174 expressed protein  similar to GP|130183...    28   7.4  
At2g34090.1 68415.m04173 expressed protein  similar to GP|130183...    28   7.4  

>At3g20830.1 68416.m02634 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 408

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = -2

Query: 341 PIRKPPLPARWPIH*CRKNLPHL 273
           P   PP P R P H CRKN P +
Sbjct: 384 PSSAPPSPLRSPPHVCRKNDPFI 406


>At2g34090.2 68415.m04174 expressed protein  similar to
           GP|1301832|gnl|PID|e239862|Z71287
          Length = 471

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 603 GFRPPVEXE--RRFW*CLVQGGRSLWKNASKAXLFTVXGLLLAFGSHV 466
           G R P++    ++ W  +V+G  SLW   S+    T+   L+ F + +
Sbjct: 128 GHRLPIDAHQAKKDWYDIVEGNHSLWDGVSRPYSETIRAFLIYFQNEI 175


>At2g34090.1 68415.m04173 expressed protein  similar to
           GP|1301832|gnl|PID|e239862|Z71287
          Length = 445

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -1

Query: 603 GFRPPVEXE--RRFW*CLVQGGRSLWKNASKAXLFTVXGLLLAFGSHV 466
           G R P++    ++ W  +V+G  SLW   S+    T+   L+ F + +
Sbjct: 128 GHRLPIDAHQAKKDWYDIVEGNHSLWDGVSRPYSETIRAFLIYFQNEI 175


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,058,532
Number of Sequences: 28952
Number of extensions: 243021
Number of successful extensions: 652
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 12,070,560
effective HSP length: 81
effective length of database: 9,725,448
effective search space used: 2149324008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)